Ictalurus punctatus (channel catfish): 108257450
Help
Entry
108257450 CDS
T04658
Name
(RefSeq) chondroitin sulfate proteoglycan 5b isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108257450
Proteoglycans [BR:
ipu00535
]
Cell surface proteoglycans
Others
108257450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
DUF6377
Motif
Other DBs
NCBI-GeneID:
108257450
NCBI-ProteinID:
XP_053531066
UniProt:
A0A9F7QXV5
LinkDB
All DBs
Position
24:complement(1101138..1117629)
Genome browser
AA seq
490 aa
AA seq
DB search
MTCRSFTTLLLFQMFTSYTHGSSVASNATRFNSSHVVGFKPALPGKALPISSSQIHAPAE
EPGSSGLGENRPSRTISADSVGGMGAGLPTMSRSEAQLDFKEENAEDVAPRWRGRTLQPD
GSVSDRSLFLSEPDDSSPVIKVSFSEPYQRHRIEIPAQEVQGGDPTSWTSEFYDYLSPEY
STTESYADDELSTPADMEDENIRYNPAGAAENGVNGACLLGFVRRNGTCQSPCDVYTSYC
LNGGQCYVVEGIGAFCRCNLQNYVWNKGSRCESVITEFQVMCIVVSGVSVMLLILFLLIV
FFSKRLHVLKTENSQLRKRSKSRPQSLQHNDNFSLSTVAEGSQANVRNECGSPPNPPPDL
AYYDNAICQNDTTKPDDPVETPVKEDESLNVQTSLTPKHENTTVVGAEDPEESGVTIDLE
LLLPNKAKTHPETSAPLHYNVFLYKLPKSPKISPGRSRHPKGLPRRGSEPGYSPMSSRKP
NPRLGKACTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcaggagcttcacgactcttctgctgttccagatgttcacctcctacacacac
ggcagctcggtggcatccaatgccactcgcttcaactcgtctcatgtggtggggttcaaa
cctgcacttcctggtaaagctctgcccatttcctcatcccagatccacgccccagccgag
gagcctggaagcagcgggctgggtgagaacaggccttccaggacgatcagcgccgactct
gtaggtggcatgggtgcgggtctacccaccatgtctcgcagcgaagcccagctggacttt
aaagaggaaaacgctgaagacgtggcccctcgctggcgcggtcgaaccctacagcccgat
ggaagcgtcagcgaccgatcgctgttcctcagcgagccagatgattccagccccgtcatt
aaagtgagcttctccgagccgtatcaacgccaccggatcgaaatccccgctcaggaggtt
cagggtggtgatcccacgtcttggacgtctgaattttacgattatctgtctcctgaatac
tccaccaccgagagctacgcagacgacgagctgtccacacctgcggacatggaggacgag
aatatccggtacaatcccgcaggggccgcggagaacggcgtgaacggcgcctgcctactg
gggttcgtccgcaggaatggcacctgtcaatcaccttgtgacgtgtacaccagttactgc
ttgaacggaggccagtgttatgtggtggaagggatcggagcattttgcaggtgtaaccta
cagaactacgtgtggaacaaagggagcaggtgcgagtcggtcattacggagttccaggtg
atgtgcatcgtggtgagcggcgtttcagtcatgctgctcatcctctttctgctaatagtg
ttcttctccaagcggctccacgtgctgaagactgaaaacagtcaactgcgaaaacgcagt
aagtccaggccccagtcgttgcagcacaatgataacttctcgctgtccactgtcgctgaa
ggttctcaggcaaacgtaaggaacgagtgtggctctccacctaaccctcctcctgatttg
gcttactatgataatgctatctgtcagaacgacactaccaagcccgacgatccagttgaa
acccccgttaaggaggacgagtctctgaacgtccagacctcgctgacacctaaacatgag
aacaccaccgtcgtcggtgctgaagatccagaagagagcggcgtgaccatcgatttggag
ctgctcctccctaacaaggcgaagacgcaccccgagacgagcgcgccgcttcactataac
gtcttcctctataagctcccgaaatcccccaaaatatccccaggacgctccaggcatccg
aaaggcctccccagacgaggctccgagcccggttacagcccgatgtcctccaggaaaccc
aaccctcgcctggggaaagcctgcacaccgtaa
DBGET
integrated database retrieval system
