Ictalurus punctatus (channel catfish): 108257466
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Entry
108257466 CDS
T04658
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 3
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108257466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257466
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257466
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
108257466
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108257466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
108257466
NCBI-ProteinID:
XP_017310759
Ensembl:
ENSIPUG00000014372
UniProt:
A0A2D0PW96
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All DBs
Position
2:1062328..1081637
Genome browser
AA seq
769 aa
AA seq
DB search
MDGSTPEFDMYGAMEWKDGVGTLPGSQLKFRVNEFGVLEVITDVGEEEGVKKAHATTTWS
VPTAQEALSVEVHCGRVSVCSNRKDSATHFLPDGHHCTNGCLHPEQQEKSKSVKEDSRMN
GEVTRVSRRRPHPAKRAEEELDEMTEVVEEDNEDNEEKDGRRLVRGGPRGRRKRRGDAAL
LRQPVSYGGRKKSWCWASYLEQEKALAAPSKLFKEHQSFPQSKSGFRVGMRLEGIDPLHP
SMYCVLSVAEVSGYRMRLHFDGYSDCYDFWVNCDSTDTHPVGWCEKTGHKLHPPKGMKSE
AFSWCSYLKTNKLQAAPKSLFHNHNATVTPLGFRVGMKLEAVDKKKPSLVRVSTVRDMVE
SRLLVHFDSWDESYDYWCDVMSPYIHPVGWCRENSRTLTTPPGYADAENFSWERYLEETS
SFPAPARSFKAKPPHSFQVNMKLEAVDVRNPVMVRVATVVDRDEHRVKIHFDGWTEEYDY
WLDADSPDIHPAGWCAKTGHALQPPISLEDTSESEQGGCPTPGCRGIGHIKGARYSGHHS
AMGCPYSEINMKKDSVLPDRLSGEMPGSGVGRPRRVEQSPDRAAHSLDKPVRHLDKADTA
TIAMEMPHQKPVGTESKRRVGRPCKVKRVEEPPQEEEVESEESSIAESKELTLQQVLHQS
VFMPCSAPSPSMPHCWDQHSKLLPSVAGITASRVATWSVEQVTEFIQGLPGCKEQVHTFK
EEQIDGEAFLLLTQTDLVKILSMKLGPALKIFNSILMFKTAEKSACNEL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggacggctcgacccctgagtttgacatgtatggggcgatggagtggaaggacggcgtg
ggaaccctccctggcagccagctcaagtttcgtgtaaacgaattcggggtgctggaggtc
ataacagacgtgggagaagaggaaggggtcaagaaggctcatgctaccaccacatggagt
gtccctacagcacaggaggctctgtcggttgaggtgcactgtggtcgtgtgagtgtctgc
agtaacaggaaggactctgctacccacttcctgcctgatggacatcactgcaccaacggc
tgcctccacccagagcaacaggaaaagagtaagtctgtgaaagaagattccaggatgaac
ggtgaggtcactcgggtcagcaggaggagaccacacccagccaagagagcggaggaagag
ctagacgaaatgacggaggtggtggaggaggacaatgaagacaacgaagagaaagatggc
cgccggctggttcgaggaggtccccggggccgcaggaagcgccggggagacgcagctttg
ctcagacagccggtttcgtacggagggaggaagaaatcatggtgctgggcttcgtatctg
gagcaggagaaagccctcgccgctcccagcaaactgtttaaagagcaccagtccttccct
cagagtaagagcgggttcagagtgggtatgaggctggagggcatcgaccccctacacccc
tccatgtactgcgttctctccgtcgccgaggtatccgggtacagaatgcgactgcacttc
gatggttactcggactgctatgacttctgggtgaactgtgactctaccgatactcaccct
gtgggctggtgtgagaaaaccggccacaagctgcatccgcctaaagggatgaagagtgag
gcgttcagctggtgttcgtatctaaagacgaataaactgcaggcagcacccaaatctctg
ttccacaaccacaacgctacagtcactcctttaggcttcagggtggggatgaagctggag
gcggtggataagaagaagccttcactggttcgcgtctccaccgttagggacatggtggag
agccgcctgctcgtgcacttcgacagctgggacgagagctacgactactggtgtgatgtg
atgagtccgtatatccatccagttggctggtgtcgggagaacagcagaaccctgaccacg
cctccaggttacgctgatgctgagaacttctcctgggagaggtacctggaggagacgagc
tcatttcccgcacctgccaggtccttcaaagcgaagcctcctcacagtttccaggtgaac
atgaagctggaggcggtggacgtgaggaaccctgtgatggtgagggtggctacagtggtg
gatcgagacgagcacagagtgaagatccatttcgatggctggacggaagagtacgattac
tggctggacgcagacagccccgacatccatcccgcggggtggtgcgccaaaaccggacac
gccctacagccgccaatcagtctggaggacacgagtgaatcagagcaaggcggatgtcct
acacccggctgcagggggatcggacacatcaaaggagcccgttattctggacaccacagt
gccatgggctgtccgtactccgagatcaacatgaagaaggactcggtcttgccggaccgg
ctgagcggggagatgccgggttctggagtgggccgaccacgtcgggtggagcagagcccc
gatagggctgcacacagtctcgacaaacctgtccgtcacctggacaaggccgacacggca
accatcgccatggaaatgccgcatcagaagccggtcggtacggagtccaagcgaagggtt
gggcggccgtgtaaggtgaaaagagtggaggagccgccacaggaagaggaagtggagagc
gaggagtcgtctatcgcggagtcaaaagagctgactttgcagcaggtgctgcatcagtct
gtattcatgccatgctccgccccttctcccagcatgcctcactgctgggaccaacacagt
aaactccttccatcagtggcgggcatcacggccagcagagtggccacctggagtgtggag
caggtgaccgagttcatccagggcctcccgggatgtaaggagcaagtacacacgttcaag
gaggagcaaatcgacggcgaggcgttcctgctgctcacccagaccgacttggtgaagatc
ctgagcatgaagctcggcccagctctgaagatcttcaactccatcctgatgttcaagacg
gccgagaagtccgcctgcaacgaactctga
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