Ictalurus punctatus (channel catfish): 108257478
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Entry
108257478 CDS
T04658
Symbol
dync1li1
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 1 isoform X1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108257478 (dync1li1)
09142 Cell motility
04814 Motor proteins
108257478 (dync1li1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108257478 (dync1li1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108257478 (dync1li1)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257478 (dync1li1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108257478 (dync1li1)
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
108257478 (dync1li1)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108257478 (dync1li1)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108257478 (dync1li1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
GTP_EFTU
PduV-EutP
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
108257478
NCBI-ProteinID:
XP_053531063
Ensembl:
ENSIPUG00000012095
UniProt:
A0A9F7TDG8
LinkDB
All DBs
Position
24:complement(1022317..1035979)
Genome browser
AA seq
503 aa
AA seq
DB search
MAAVGRSTLIAASIHVNNSSTADNQNQNQEEEDGQNLWSSILSEVSTRSRSKLPSGKNVL
VMGEVASGKTTLVAKLQGVEEYMKGRGLEYLYFSVHDEDVDDHTRCNAWVLDGDLYHKGL
QKFAMCVENLADSLAVLVVDLSRPWLALDSLHKWTSVLRDYLDKLRVPPETMRELEHRLV
KQFQEYVEPGSSVDAVPQRRNAESEEECVVLPLGDNTLTHNLGIPLVVLCTKCDAISTLE
KEHDYRDEHLDFIQLHIRRFCLQYGAALLYTSMKENKNLDLTYKYLIHRLYGFPFHFPAQ
VVEKDSVFIPSGWDNEKKIAILHENLQSIKADDSFEDVIVKPPVRKFVHEKEIQAEDDQV
FLVKLQSLLAKQPAATAGRPVDTSNRAPTGSPRTTNRSAAANVANVMPMQSGTKKIDPNM
KGGQTSEGVLANFFNSLLTKKAGSPGPGQPSGGGSNTPGTVRKSGSKLGLTDVQAELDRI
SSKSDLDHSAPNATTPPAENDES
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagggaggagcacactgatagctgctagcatacatgtaaataacagcagc
accgcagacaaccagaaccagaaccaggaggaggaggacgggcagaacttatggtcgtcc
atactgagcgaagtgtcaacgcggtcccggtccaaactgccgtccgggaaaaatgtgctg
gttatgggtgaggtggcatctggaaagaccacgctggtggccaagctgcaaggtgtggag
gaatacatgaaagggcgtggcttggaatatctctatttcagcgttcatgacgaggatgta
gacgaccacacacggtgtaacgcctgggtgctggatggagatctgtatcataaaggcctg
cagaagttcgccatgtgtgtggagaacctggcggactctctggccgtgttggtggtggac
ctgtcccggccctggctcgcccttgactcgctccacaaatggaccagcgtgctgagggac
tacctggacaaactgcgggttcctcccgagaccatgagagagcttgagcacagattggtg
aagcagttccaggagtacgtggaaccaggaagcagtgtggacgcagtgccccagaggaga
aacgcagaatcggaggaggagtgtgtggtgcttcctctgggtgacaacacactcacacac
aacctgggcatccctctagtggtgctgtgtaccaagtgtgatgctatcagcactttggag
aaggagcacgattacagagacgagcacttagacttcatccagttgcacatccgacgcttc
tgtctgcagtacggcgcagcgctgctctacacatccatgaaggagaacaaaaatctagac
ttgacttacaaatacctcatccacaggttatacggcttcccgttccacttccccgcccag
gtggtagagaaggattcggtgtttattccatcaggatgggacaacgagaagaagatcgcc
atcctacatgaaaacctccagagcatcaaagcagacgacagctttgaagatgtaatagtg
aagcccccggttcggaagttcgtacacgagaaggaaatccaagcagaagatgaccaggtg
tttctcgtgaagctgcagagtctgttagccaaacagcctgcagcgactgccgggaggccc
gtggacacctcgaacagagctcccaccggctccccgaggacgaccaatcgctccgcagcc
gctaacgtggctaacgtcatgcccatgcaatcaggtaccaagaagattgatcccaacatg
aaaggaggtcagaccagcgagggcgtgctggctaacttcttcaacagcctcctgactaag
aaagcaggttctcctgggccgggccagccctcgggaggtggcagcaacactcctggaaca
gtgcgcaagtctggatctaagttgggtttgaccgatgtccaggcggagctcgaccgcatt
tccagtaagtcggacctggatcactctgcccccaacgcgaccacgccccctgctgaaaac
gacgagtcctga
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