Ictalurus punctatus (channel catfish): 108257498
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Entry
108257498 CDS
T04658
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108257498
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108257498
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108257498
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108257498
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
108257498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
zf-CCHC
Drc1-Sld2
zf-CCHC_3
ResIII
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
108257498
NCBI-ProteinID:
XP_017310800
Ensembl:
ENSIPUG00000004473
UniProt:
A0A2D0Q0A9
LinkDB
All DBs
Position
24:16890167..16907522
Genome browser
AA seq
1490 aa
AA seq
DB search
MDRYNDLKIQLKQWEHSFVQTHNRKPNKDDIAAAPEDTKKLYKEYRMLKEAKEKTTSENE
DHVHKKDVQSPDCGDCWGSHLNRKNLPAATPKLTSRDKETLQASSQYFGMKLKSNLINSL
SKDRSFSLKKAVTPRRNPGKNWKDGGTACTAHEDMSTPSSKPANTSPALSACPPAQTGNG
EDEPSDPFPSFTPSKLSSLSTKTPDKSLEKAQFLRQSMTKRLSCVDRGWLERCQVFTAVK
DEHIPVTGNLDLPEKDRVVPSSARSEKVAAMNGALRDSASSEDVSRVRVEELPVDVDDSL
GTADIEMKLDRVSEGQDGTDESSPSLEARKQTKKPRSRKAQDSEGSDYEQKVVRKKGRKR
PRETEKVEEQAGQTESVQKKRRTKKDDSVEEEPVKKGRKKKGRGAEEAESTLETKVPQKS
KMPQENLLGEVNEEDVKAVLSRKKNPVRSRVTKNTDGNFVKINLKKKSHVKGFALRGAAL
RKHMYVQKFQLKGERFGGGGGRGRGRFGGFNRQGDVCYKCGGTGHWARDCRGAALAPGVG
GASQKDAALEEEEEEPFQLPTLEEVARATGTLCSQPIVSSSVGDEADEKEEDRGEEILLN
VMRPDYERPAPPPPMEPLYSPREDGKVQEVPPEVYQALRDFGYKTFRPGQETAIMRILSG
LSTLVVLSTGMGKSLCYQLPAYLYAQRSKCITLVVSPLVSLMDDQLSGIPPKLKAACIHS
NMSLKQRETAIEKVKAGQVHVLLLSPEALVGGGHSGSGCLPPADQLPPVAFACIDEAHCV
SEWSHNFRPCYLRLCKVLRDRLGVRCLLGLTATATLSTALDIAHHLGIRDSEGIAVRSAA
VPHNLQLSVSMDGDKDQALVSLMKGERFGALDSIIVYCTRREETSRISALLRTCLQGVML
RESSRPAKEVEEDNPVSKKKKALARKKIRKPLKWIAEAYHAGMSASERRRVQNNFMCGEL
RVVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDL
HELRRHIYADTVDHFTVKRLVQKVFPPCKCRRIHQHQELAQAMEVDDAELMELMDHCEAS
GDNQHEQRDTATPAQIQQTEPEQTRTTHQNPRQPERSQEWNKATVQLTEGESEGFIAQHG
EEEKSQNGQKDEGEKMGGSENGSEVQESEGGVSGQRVCHTHERALPMQDTVDELDITEEG
LETLLCYLELHPQRWVELMHPTLSMCRLVCYGGPRELRKLIKVCAPVAVVLARKRLAGEK
VEDCDSLEFDVVELADTMGWQLPLVKRGLRQLQWGGSFGGSGRSGIHVEFSALSFYFRSY
GDLAAEELDEVCAFLYGRVQTQERTQLYQLKASFKAFRSVAYRNCSFCMDELDEARSLRL
KELLADYFEKRRDLDLSKYKEEQDDEDETFSKFKLKDWEDQIRADVRAFLASRSDEKFSG
RAVARIFHGIGSPCYPAQTYGRDRRYWRKYLQFDFNEIIRLATQEIIRTR
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggaccgatataatgacttaaaaattcagttaaaacagtgggaacactcgtttgttcaa
acacacaacagaaaaccaaacaaggatgatattgctgcagctccagaagacacgaaaaaa
ctttacaaagagtaccgcatgctcaaagaggcaaaggagaagaccacaagtgagaacgag
gatcacgtacacaagaaggatgtccagtctccagactgcggcgactgctggggttctcat
ctcaatcgtaaaaacctgcctgcagcaacacccaaactcacttctagagataaggagaca
ttgcaagcctcttcccagtactttggtatgaagctgaagtccaatctcatcaactcttta
tcgaaggatcgatcattttctctgaagaaagctgtcacccctcggcgaaacccaggaaag
aactggaaagacggtggaaccgcttgcacggcacatgaggacatgagtactccttcctca
aaacctgctaacactagtccagcgctgtccgcctgtcctccagctcaaactggaaacggc
gaggacgaaccgtcagatccctttccttctttcactccttctaaactgtcctcactaagc
acgaagactccagataagagcctggagaaagcccagttcctcaggcagtccatgaccaag
aggctatcgtgtgtggacaggggctggctggagcgctgtcaggtcttcactgcggtgaaa
gacgagcacataccggtcacgggtaatttagacctgccagaaaaagaccgggtcgttcca
agtagtgctagaagtgaaaaagtggctgcgatgaatggagcattgagagactcggcgtca
tcggaggacgtgtctcgggtacgcgttgaggaacttccggtagatgttgatgacagtttg
ggaaccgctgatatagaaatgaagctcgatcgtgtttcagagggtcaggacgggaccgat
gaatccagtccttctttagaagccagaaaacaaacaaaaaaacccagatcaaggaaagct
caagactctgaaggttcagattatgagcagaaggttgtaagaaaaaagggacggaaaagg
ccgagagaaaccgaaaaagtagaagaacaagcagggcaaaccgaaagtgtccaaaagaaa
cgcaggaccaagaaagatgactccgtggaggaggagcctgttaaaaaaggacgcaaaaag
aaaggaagaggtgccgaggaggcagaaagcactcttgagactaaagtacctcagaaatca
aagatgcctcaggagaacctgctaggagaagtgaatgaggaggacgtgaaagcagtgtta
tccaggaagaaaaatccagtcagaagcagggtgaccaaaaacacagacggaaactttgtg
aaaatcaacctgaagaagaaatctcatgttaaagggtttgccctgaggggtgcagctctc
cgcaagcatatgtacgtgcagaagttccagctgaagggcgagaggtttggcggaggcggt
gggcggggcagaggaagattcggagggtttaaccgacagggagacgtctgctataaatgt
ggtggaacgggacactgggcacgggactgtcgtggagcagctttggctcctggtgtggga
ggggcgtcacagaaggacgcagccctggaggaggaggaagaggagccgttccagctgccc
accttagaggaagtagctagagcgacgggaacgctgtgctctcagcctattgtgtcctcg
agtgtcggagacgaggcagacgagaaagaagaagaccgaggagaggaaatcctgctaaat
gttatgagacccgactacgagcgtcccgctcctcctccacccatggagccactgtacagt
ccacgagaggacggcaaagtgcaggaagttcctcctgaggtgtaccaggctcttcgggac
tttgggtacaagacctttaggcccggccaagagacggccatcatgagaatcctttcaggt
ttgtctacccttgtggttctgtccactggcatgggcaaatctctgtgctaccagctccct
gcctacctctatgcacaaaggtcaaagtgcataaccctggttgtgtcacctttggtatcg
ctaatggatgaccagctctctgggattcctcctaagctgaaagcagcgtgtatccattcc
aacatgtctctgaaacaaagagagaccgctattgaaaaggtgaaagcaggtcaagttcat
gttttactgctgtctcccgaagctctggttggtggaggtcactctggctccggttgtctc
ccccctgctgatcagctcccccctgtggcctttgcctgcattgatgaagctcactgtgtg
tctgagtggtcacacaacttcaggccgtgctacctcagactgtgtaaggtactgagggat
cgtctgggtgtgcgctgtttgctgggtctgacagccactgccaccctgtccactgcgctg
gacatcgctcatcacttgggcatcagggattctgagggcatcgctgttcgctcggctgcc
gtcccacacaacctccagctctcagtgtccatggacggagacaaagaccaggctctggtg
tccttgatgaaaggagagcgcttcggtgcacttgactccattatagtgtactgcactaga
cgagaggagacgagccgtatctctgcgttgctgcgcacctgcctacagggggtgatgctg
agagagtcctcacggcctgccaaagaagtcgaggaggacaatcctgtgagcaagaagaag
aaagcattggccaggaagaagatccggaagccgctgaagtggatcgctgaagcgtaccac
gcgggcatgtcggcctcagagcgccggcgtgtgcagaataacttcatgtgtggcgagctg
cgggtggtggtggccactgtggcattcggaatgggcttggacaagtcagatgtgcgtggt
atcatacactacaatatgcccaagagcttcgagagctacgtgcaggagattggacgagcc
ggaagagacggagaacccgcacactgccacctgttcctggatccggaaggtggagatctg
cacgagctgcgcagacacatctatgcagataccgtggaccactttactgtcaagaggctg
gtgcagaaagttttccctccctgcaagtgcaggcgtatccatcagcaccaggaattggcc
caggccatggaggtggatgatgccgagctgatggagctgatggatcactgtgaagcttca
ggagacaaccaacatgaacagcgagacacagcaacacccgcccagatccaacaaacagaa
ccagagcagacgagaaccacgcaccagaacccacgccagccagaacgttctcaggagtgg
aacaaagcaacagtgcagctaacagagggagaatcagaaggtttcattgctcagcatggg
gaagaagagaagtcacagaacggacaaaaagatgagggtgagaagatgggaggaagtgaa
aatggttcagaggtgcaagagagtgaaggcggtgtgtcgggccagcgtgtgtgtcacact
cacgagagagcgcttccaatgcaggatacggtggacgagctggatatcacagaggagggt
ttggagactttgctgtgttacctggagctccaccctcagcgctgggtggagctgatgcat
ccgaccctctcaatgtgtcgcctggtgtgttacggaggacctcgggagctccgcaagctc
atcaaagtgtgtgctcccgtggcagtggtcctggcgaggaaacggctggccggcgagaag
gtggaggactgtgactctctggagtttgacgtggtggagttggcagacacgatgggctgg
cagctcccgctggtcaagagagggctgagacagctgcaatggggtggttcttttggaggc
tcaggtcggagcggtatccacgtagagttctctgctctctccttctacttccgctcctat
ggagatctggcggctgaagaactggacgaggtgtgtgcgtttctgtacggcagggtccag
acgcaggagaggacgcagctctatcagctaaaagcctcctttaaagctttccgcagtgtt
gcgtatcggaactgtagcttctgcatggatgagctggacgaagccaggagcctgaggctg
aaggagcttctggctgattattttgagaagaggcgagacctggacctgagcaagtacaag
gaggagcaggacgatgaggacgagaccttcagcaagtttaagctgaaggactgggaggat
cagatccgtgctgatgtgagagctttcctggccagtcggagtgatgaaaagttctcaggc
cgtgccgtggcgaggattttccatgggattggaagcccgtgttatccggcgcagacgtac
ggccgagaccggcgttactggcgaaaatatctccagtttgacttcaatgagatcatccgc
ttagccactcaggagattattagaacaagataa
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integrated database retrieval system
