Ictalurus punctatus (channel catfish): 108257546
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Entry
108257546 CDS
T04658
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108257546
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
Patched domain-containing proteins
108257546
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
108257546
NCBI-ProteinID:
XP_017310901
UniProt:
A0A2D0PZN7
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All DBs
Position
25:417682..428700
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AA seq
896 aa
AA seq
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MMLRQAIYGALKASFYWLGLFVSRHPVFFLTVPAVLTALLGGAALRGFAPEADLERLLAP
AHSLAKVERRLADSLFPVERSKHRLYSDLHTPGRYGRLILLAKRGANVLELAEQVLRVHR
HVLELRVAHRGFNYTFAHLCVLDGQREPRRCVLDDIIAIFEDIREAILNNNTFAKVPVSY
PNTTLRDGRVAFIGHQLGSVVLASHGRERHVKSARAVQITYYLRRLAPTVQDAIAEKWEN
EFGKMAQHLATASPDLHVQALTSFGLWRDFHATGALAKGEVLVGLVLVLLAATISSSMRD
CLRGKPFLGLLGVLTVCSANVTAAGIFFISHGKFNSTLLGIPFFAMGHGTKGVFELLAGW
RRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIESVKVFCQSMCVAIL
VNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWFKTMMSDGHDLSTHH
DSMPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGCLQISDGYNIVNLLS
SNSPSVSFALTQQKLFSNYSPVIGFYIYEPIEYWNSTVQEHLKTLGQGFNKISWIDNYFN
YLKVTNVSASTKSDFINILKTAFLRRPEYQHFTEDIIFSKNGDEYDIIASRMYLVARTTE
KTREEVVELLERLRPLSLINSIKFIVFNPTFVFMDRYSSSVVSPILTSGFSVLTILILTF
FLVINPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIYTLNFAMDHCAPHLYTF
VLATEHTRTQCIKISLEEHGAAILQNASCFVIGIMPLLFVPSNLTYTLFKCSLLTTGCTV
LHCFIILPVFLTFFPPSKKRHKKKKRAKRKEREREREREEIECIEVRENPDHVTSV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcggcaagcgatctacggcgcgctcaaagcctcgttctactggctcggcttg
ttcgtgagccggcacccggtattcttcctgaccgtgcccgccgtcctcacggcgctgctg
ggcggcgcggcgctgcgtggattcgcgcccgaggctgacctggagcggctgctcgcgccc
gcgcacagcctcgccaaggtcgagcggcgcctcgccgacagcctgttcccggtggagcgc
tcgaaacaccgcctctactcggacctgcacacgccgggccgctacggccgcctcatcttg
ctcgcgaaacgcggcgccaacgtgctcgagctggccgagcaggtgctgcgcgtgcaccgg
cacgtgctggaactgcgcgtcgcgcaccgcggcttcaactacacgttcgcgcacctctgc
gtgctcgacggccagcgcgagccgcgccgatgcgtcctcgatgatataatcgcgatcttc
gaggacatccgcgaggccattctaaacaacaacacgttcgctaaagtgcccgtgagctac
ccgaacaccacgttaagggatggccgagtggcatttatcgggcaccagctgggcagcgtt
gtgctggcatcacatgggcgtgagcggcatgtcaagtcggcacgggctgtccagatcacc
tactacctacgtcggctggctcccacggtacaggatgctattgctgagaaatgggagaac
gagtttggtaagatggcgcaacatttagcaacagccagccctgacctgcacgtgcaggcg
ttaacatcgtttggtctgtggcgcgacttccatgcgacgggggcactggcgaagggcgag
gtgctggtgggcctggtactggtgctgctggctgccaccatctccagctctatgcgtgac
tgtctacgtgggaagcccttcctggggctgctcggtgtgctcactgtctgcagcgccaat
gtcaccgctgctggcatctttttcatctcacatggcaagttcaactccacgctgctcggc
atccccttctttgccatggggcacggaaccaaaggagtgttcgagctcctggctggctgg
agaagaacccgggagagtctgccgttcaaagagcgagtggcagatgcctttgccgatgtg
atggtatgctacaccatgacgagctcgttgtatatcatcacgttcggcatgggcgccagt
cctttcaccaacatcgagtccgtgaaagtgttctgtcagagcatgtgcgtggccatcctg
gtcaattacttctacgtcttttccttttacggctcctgcctggtgtttgctggccaactc
gaacagaatcgctaccacagtgttttctgctgcaaaatcccctctgtagaatacctggac
cgccagcccacatggttcaagaccatgatgagtgatggccatgatctttccacacaccat
gacagtatgccctaccagaatcactttattcagcacttcctgagggagcattacacagag
tggattactaacacatatgtcaagccctttgtggtcatcctctacctgatctatgcctcg
ttttcattcatgggatgtttacaaatcagtgacggctacaatatagtgaatttactctcc
agcaactcgcccagtgtgtcgtttgccctgacccagcagaaactgttcagcaactatagc
ccagtgataggattctacatctatgagcctattgaatactggaactccacagtacaggag
cacctcaagacactggggcagggtttcaataagatttcctggattgataattactttaat
tatttgaaggtcacaaatgtcagcgcatcaaccaaaagcgatttcatcaatattctcaag
acggcatttcttagaagaccggagtaccagcacttcacggaagacataattttctcaaaa
aatggcgatgagtatgacatcattgcatccaggatgtacctggtagcgagaaccactgag
aagacaagggaggaggtggtggagctgctggagagactcagacccctctctcttataaac
agcatcaagttcatcgtcttcaaccccacctttgtgttcatggaccgctacagttcctca
gttgtctccccaattctaacatcaggtttcagtgtcctgaccatcctcatcctcacgttc
ttcctcgtcattaaccccttagggaacttctggttgattttgaccgtcacgtctgtggag
ctgggtgtcctaggcctcatgacactctggaatgtagatatggacagtatctctatcctg
tgccttatttatactctgaactttgccatggatcactgtgcccctcacctctacacgttt
gtactggccaccgagcacaccaggactcagtgcatcaagatttcgctcgaagagcatggg
gcagccattttgcagaatgcctcgtgctttgtgattgggataatgcccctgctctttgtg
ccttccaacctgacctacacactgttcaagtgctcactactcaccaccggatgtacagtg
ctgcactgtttcatcatcctcccggtcttcttgacttttttccctccctccaagaaaagg
cacaagaaaaagaaacgggcgaagaggaaagagcgcgagagggagcgcgagagggaggag
atcgagtgcatcgaagtcagagagaaccccgaccatgtgaccagcgtctga
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