Ictalurus punctatus (channel catfish): 108257556
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Entry
108257556 CDS
T04658
Symbol
six1b
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257556 (six1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108257556 (six1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
108257556
NCBI-ProteinID:
XP_017310915
Ensembl:
ENSIPUG00000017473
UniProt:
W5U7J8
LinkDB
All DBs
Position
25:complement(7402768..7405860)
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AA seq
279 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENSNAGANKQNQLSPLDGGKSLMSSSEEDEFSPPQSPEQNSALLLQANMN
HPASSYSMSGLAMQSHPHQHQLHDSILGPLTSSLVDLGS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttgccctcgttcggcttcacgcaggagcaggtcgcttgcgtgtgcgaggtg
ctacagcagggcggaaacctcgagcgactgggccgctttttgtggtccctgccggcctgc
gaccacctccacaagaatgagagtgtgctcaaggctaaagctgtagtggcgttccaccgt
ggcaactttagggagctgtacaaaatcctggagagccaccagttttcgccgcacaaccac
cccaaactgcagcagctgtggctgaaagcccactacatcgaggccgagaagctgaggggg
cggccgctgggcgctgtgggtaaataccgagtacggaggaagtttcctttaccgcgcacc
atatgggacggtgaggagaccagctactgtttcaaagagaagagccgcggcgtgctgagg
gagtggtacacgcacaacccatatccctctccacgagaaaaaagagagctggctgaagcc
acagggctcacaaccacacaagtgagcaattggtttaaaaacaggagacagagggatcga
gccgctgaggccaaagaaagagagaacagcgagaacagcaacgcaggagcgaacaaacag
aaccagctgtctccgttggacggcggcaagtcgctaatgtccagctcagaagaggatgaa
ttctctcctccgcagagtcccgagcagaactccgctctcctgctgcaggctaacatgaac
caccccgcctcctcctacagcatgagcggcctggccatgcagagccacccgcaccagcac
cagctccacgactccatactgggacctctgacctccagcctggtggacctgggctcttaa
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