KEGG   Ictalurus punctatus (channel catfish): 108257725
Entry
108257725         CDS       T04658                                 
Symbol
riox1
Name
(RefSeq) ribosomal oxygenase 1 isoform X1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ipu03009]
    108257725 (riox1)
   03036 Chromosome and associated proteins [BR:ipu03036]
    108257725 (riox1)
Enzymes [BR:ipu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108257725 (riox1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     108257725 (riox1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     108257725 (riox1)
Ribosome biogenesis [BR:ipu03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    108257725 (riox1)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108257725 (riox1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_1 Cupin_8
Other DBs
NCBI-GeneID: 108257725
NCBI-ProteinID: XP_047007000
Ensembl: ENSIPUG00000020831
UniProt: A0A979EM17
LinkDB
Position
25:complement(4483547..4495443)
AA seq 543 aa
MKRNMSAFAFYQSEKEKTARVQQASVSPAKKKKKRKQTGLNPSMSAKKKLKKIPEERKTE
EEENHDEPGDEEQRASNGTDGVNSDTLHTLLTELGKVDNSRERANILFQWLIHPVSAKTF
FRDNWEKKPLLIRRHNPHYYEGLFSTAEFDRILRNDDVQYGVNLDVTSYTDGKRETHNPP
GRALPYSVWDFYENGCSLRMLNPQAFSSTVWNVLSILQEKFGSMAGANVYLTPAGTQGFA
PHYDDIEAFVVQLEGKKHWRVYNPRSEDDMLSLVSSPNFSQSEIGNVELDVVLEQGDLLY
FPRGFIHQGNCLPDAHSLHITISSYQRNSWGDLLLKVMPAALEMAMEEDVEFRKGLPLDY
LTYMGVQNSDKEEPRRDRFLSHMEVLMKKLVSYAPVDAAVDQKAREFLHDCLPPVLTPAE
KASSVYGTPVRFEDGEVVDLNTHMKSSTKIRLLRAGIARLCSDGEAVHLYYTTENSRVYH
KAELKCMEMNAEHTDAVEFLIHSYPKFVTVSSLPCDSAEDKVSLAEMLFAKGLIHTSEPL
TTK
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgaagaggaacatgtctgcgtttgctttctatcagtcagaaaaagaaaagacagcgcgt
gtacagcaggcctcagtttctccagcaaagaaaaagaagaagaggaagcagaccggatta
aatccgagcatgagcgccaagaaaaagttgaaaaagatcccagaggagagaaagacagag
gaggaggagaaccacgatgagcctggcgatgaggagcagcgagcatcgaacgggaccgat
ggagtgaacagtgacacacttcacacacttctcactgagctgggtaaagtggacaacagc
agggagcgagcgaacatcctgtttcagtggctcattcatcctgtttcagccaaaaccttc
ttcagagataattgggagaagaagcccctcttgatcagacgccataatccacactactat
gagggccttttctcaacagcagagtttgaccgcattttgagaaatgatgatgtccagtac
ggagtgaatctggatgtgacgagctacacggacggcaagagagagacacacaatcctcca
ggaagagctctgccctactcggtgtgggatttctatgagaatggttgctcgctgcggatg
ctgaaccctcaggccttctcctctaccgtgtggaacgttctgtccatcctgcaggaaaag
ttcggcagcatggcaggagccaacgtgtacttaacaccagcaggaacacagggattcgca
ccacattatgacgacattgaggcgtttgtagtgcagctggaagggaagaagcactggaga
gtgtataacccacggtctgaagatgacatgttatcactcgtgtcgagccctaatttcagt
cagtccgagatcggaaacgtggagctggacgtggtgctggagcagggtgatttgctgtat
tttcctcgcgggtttattcaccagggcaactgcctcccagacgcccactccctgcacatc
accatctcctcgtaccagaggaacagctggggtgatctgctgctgaaggtgatgccagct
gctttggaaatggcgatggaggaggatgtggagtttagaaagggacttcctcttgattac
ctcacctacatgggagtgcagaactctgacaaggaagagccacgtagagacagatttttg
tcccacatggaggttttaatgaagaagttagtgtcctatgctccggtggacgctgctgtg
gatcagaaagcacgcgagtttctgcacgactgtctgccacctgtgctaactccagcggag
aaagcgagcagcgtgtacggcactcctgtgcgattcgaggatggagaggttgtggatttg
aacacgcacatgaagtcttcgaccaaaataagactcctccgcgcaggaatcgccagactg
tgcagcgacggtgaggcggttcatctttattacaccaccgagaactccagagtttatcac
aaagcagagctcaagtgcatggagatgaacgcagagcacacagacgcggtggagttcctg
atccactcatacccgaagtttgtcacggtgtcaagtttaccctgtgactccgcagaagac
aaggtgtccttggcagagatgttgtttgcaaaaggactgatccacacatccgaacctttg
accacaaagtga

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