Ictalurus punctatus (channel catfish): 108257776
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Entry
108257776 CDS
T04658
Name
(RefSeq) integrator complex subunit 9
KO
K13146
integrator complex subunit 9
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108257776
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108257776
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IntS9_C
Lactamase_B_6
Beta-Casp
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
108257776
NCBI-ProteinID:
XP_017311280
Ensembl:
ENSIPUG00000020540
UniProt:
W5UBX0
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Position
25:complement(4537444..4557153)
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AA seq
658 aa
AA seq
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MKLYCLSGHPTLPCNVLKFKCTTIMLDCGLDTTSALCFLPLPLVHSPRLSKLPGWASKDG
TVNLEKELKECAGRVFVDSEPEFCLPERELLDLSTIDVILISNYHCMMALPYITEHTSFS
GTVYATEPTFQIGRLLMEELVNFMERVPKAQTATCWKNKDIQRMLPGPLKDAVEVWSWKK
CYSIQEVNSALSKVQLVGYSQKVELFGAVQVTPLSSGYSLGSSNWIIQSHYEKVSYVSGS
SLLTTHPQPMDQSSLKNSDVLILTGLTQIPTANPDGMLGEFCSNLAMTVRAGGNVLVPCY
SSGVIYDLLECLYQFMDSANLGNTPFYFISPVANSSLEFSQIFSEWLCQTKQSKAYLPEP
PFPHAELIQTNKLKHYPSIHGEFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTI
IFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKEVQPLHVVCPEQYTQPPP
SQSHRSDLMLELQPPPLPYSRCSVLNLPFHRTYERVQLLPELAKTLVPSEIKPGISVANV
SAVLQSKDNKHVLQLVPKPAPVAPSKKRKRLMEEVPELSSPKPLLSGAVPLEAFLASLHK
SGISEVKVEETADGHILHLQAEDALIQLEEDATHIVCDNNEPLRTALRDLVLRFLQKL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtactgtttgtctggtcacccgacgttgccttgcaatgttctcaagtttaaa
tgtaccaccatcatgttggactgtgggctggacaccacctctgctctgtgtttcctccct
ctgcctctggtgcacagtccaagactgtcaaaactcccaggatgggcctccaaggatgga
acagtgaaccttgagaaagagctaaaggagtgtgccggtcgtgtatttgtggactctgag
ccagagttttgtcttcctgagagagagctgctcgacctgtcaactatcgacgtcatcctg
atttctaactaccactgcatgatggctctgccgtacatcactgagcacaccagcttctca
ggcaccgtctacgccactgagcccaccttccagatcggcagactgctgatggaggagctg
gttaatttcatggaaagagttccaaaggctcagactgccacctgctggaagaacaaggac
atacaacggatgttgcctgggcctttgaaggatgcagtggaagtgtggtcatggaagaag
tgctacagcatacaggaagtgaactccgcgctaagtaaagtgcagctggtgggctactca
cagaaagtggagttgtttggtgcagtgcaggtcacccctctgagctccggctattccctg
ggcagttcaaactggatcatccagtctcactatgagaaagtgtcttatgtctccggctcg
tccttgctcaccacacaccctcagcctatggaccagagctctctgaagaacagtgacgtt
ttgatcctaactggcctgacccagatccccacagccaacccggacggcatgctgggagaa
ttctgcagcaacctggccatgacagtccgagctggagggaacgttttggtgccatgttac
tcctctggtgtgatttatgacctgctggagtgcctctaccagttcatggactctgctaac
ctgggaaacacacccttttacttcatctcacctgtggccaacagctcgctggagttctct
cagattttttcagagtggctgtgtcagactaagcagtctaaggcttacctccctgaacct
cctttcccacatgctgagctgatccagaccaacaaactgaagcattacccgagcatccac
ggcgagttcagcagtgatttcagacagccatgcgtggtgtttacggggcatccatcactg
cggttcggggatgtcgtgcacttcatggagctgtggggcaaatccagtctcaacacaatc
atcttcactgagcctgatttctcctacctggacgctttggctccctaccagccgctagcc
atgaagtgtgtgtactgccccatcgacacacgcctcaacttccaccaggtttccaaactt
ctgaaggaagttcagccacttcatgtggtgtgtcctgagcagtacactcagcctcctccc
tctcagtctcaccggtctgatctgatgttggagctgcagcctccacctctgccctacagc
cgatgctccgttctcaatctgcccttccaccgcacgtatgaacgtgtccagcttctgccc
gagcttgccaaaactcttgtaccttctgagattaaacctggcatctccgtggcaaacgtg
tcagcagtcctgcaatcgaaggacaacaagcatgtcctccagctggtgcccaagcctgct
cctgtggctcccagtaaaaagaggaagaggctgatggaagaggttcctgagctgtcaagc
ccaaagcccctgctgagcggagctgtgcctctggaagctttcctcgcatcactgcacaag
agcggaatctccgaggtgaaggtggaggagacggcagacggtcacatcctgcacctgcag
gccgaggacgcgctcatccagctggaggaagacgcaacgcacatcgtctgtgacaacaac
gagccactgcgcactgccctcagagacctggtgctccgcttcctccagaagctctga
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