Ictalurus punctatus (channel catfish): 108257782
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Entry
108257782 CDS
T04658
Symbol
ccr6a
Name
(RefSeq) C-C chemokine receptor type 6a
KO
K04181
C-C chemokine receptor type 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108257782 (ccr6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108257782 (ccr6a)
04030 G protein-coupled receptors [BR:
ipu04030
]
108257782 (ccr6a)
04050 Cytokine receptors [BR:
ipu04050
]
108257782 (ccr6a)
04090 CD molecules [BR:
ipu04090
]
108257782 (ccr6a)
Cilium and associated proteins [BR:
ipu03037
]
Motile cilia and associated proteins
Sperm associated proteins
108257782 (ccr6a)
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Chemokine
CC Chemokine
108257782 (ccr6a)
Cytokine receptors [BR:
ipu04050
]
Chemokine receptors
CC Chemokine
108257782 (ccr6a)
CD molecules [BR:
ipu04090
]
Proteins
108257782 (ccr6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
TMEM70
UCP029505
Phage_Mu_Gp12
Motif
Other DBs
NCBI-GeneID:
108257782
NCBI-ProteinID:
XP_017311306
UniProt:
A0A2D0Q0V0
LinkDB
All DBs
Position
25:2054367..2059157
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AA seq
410 aa
AA seq
DB search
MMDYGNETSYDYQTSYENKTSFEDEIFYDYESPCDVDDSGNASVKYYLQVYVHSLICIVG
FIGNVLVILTYAFYKRTKSMTDVYLLNVAIADVLFVVALPLIIFSEQSNWALGDWSCKLL
RGVYSINLYSGILLLACISLDRYLAIVQARRSFRFRSSMLVYSYVICAVVWLSALLLTLP
TFMFYERYAPRETFNMSMSYETVTNSDSTPVTKETKTLATEVPDSTQQEQYVCFFRFKDN
NTAKRMKVLVPSAQVAVGFCFPLLVMGFCYSSVVFTLLRAKNFQRHKAVRVVLTVVLVFI
ICHLPYNAALFYDIIYMFSGSDCEGHSITQLLLILTESLAYLHCCLNPLLYAFIGVKFRN
HFRKVMEDLWCLGKSYIGARRTSRATSEAYLSSRRSVDSSGYENGTSFTM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatggattatggcaatgagacttcatatgactatcagacttcatatgaaaataagact
tcatttgaagatgagattttttatgactatgagagtccatgtgacgtggacgattcagga
aacgcttctgttaagtattatctccaggtctacgtgcactcccttatctgcattgtaggg
ttcattggcaatgtcctggtgatccttacatatgctttctacaagcgcaccaagtccatg
actgatgtttacctactgaacgtggccatagcagatgtcctgtttgtcgtggccctgcct
ctgatcatctttagtgagcagagtaactgggctttgggtgattggtcctgcaagctgttg
cgtggtgtctacagtatcaacctgtacagcggcatcctgctgctggcttgcatcagttta
gaccgctacttggcgatcgtccaagctcgccgctctttccgattccgctcgagcatgctg
gtctacagttacgtgatctgtgcggtcgtctggctttcagccttgctcctgactttgccc
accttcatgttctacgagcgctacgcacccagagaaacattcaatatgtcaatgtcttac
gaaacagtgacgaactctgatagtacaccagtgactaaggagacgaagactttggctact
gaagttccagacagcacgcaacaggagcaatacgtgtgcttcttccgcttcaaggacaac
aacaccgcaaagcgtatgaaggtgctagtgccgagtgcccaggtggctgtggggttttgc
ttcccgttgctggtcatgggcttctgctactccagtgtggtgttcacactcctgcgtgcc
aagaacttccaaagacacaaggctgtgcgtgtggtcctgaccgtggtgctggtcttcatc
atctgtcatctgccctacaatgcagcactgttctacgacatcatttacatgttctccggt
agcgattgcgagggccatagtatcacacagctgctgctgatcctcactgaaagcctggcc
tacctgcactgctgcctcaacccattgctctacgccttcatcggtgtcaaatttaggaac
cacttccgcaaggtcatggaggacctctggtgccttgggaagagttacatcggggcacgg
cgcacgtcacgagccacctctgaggcatacttatcctcccgaaggtctgtagacagctca
gggtatgaaaacggcacctcgttcaccatgtga
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