Ictalurus punctatus (channel catfish): 108257814
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Entry
108257814 CDS
T04658
Symbol
ppp2r5cb
Name
(RefSeq) protein phosphatase 2, regulatory subunit B', gamma b isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108257814 (ppp2r5cb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108257814 (ppp2r5cb)
04114 Oocyte meiosis
108257814 (ppp2r5cb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108257814 (ppp2r5cb)
09158 Development and regeneration
04382 Cornified envelope formation
108257814 (ppp2r5cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108257814 (ppp2r5cb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108257814 (ppp2r5cb)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257814 (ppp2r5cb)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108257814 (ppp2r5cb)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108257814 (ppp2r5cb)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108257814 (ppp2r5cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
108257814
NCBI-ProteinID:
XP_017311368
Ensembl:
ENSIPUG00000022710
UniProt:
A0A2D0PXZ2
LinkDB
All DBs
Position
25:complement(2519378..2553455)
Genome browser
AA seq
580 aa
AA seq
DB search
MSAMPNKTKKDKESPKSGKVSKTAGQENSDHEGSNRKGSNSVPPTTQLLKGKQSGSQAPV
KKEKRQSSSRFSLSNNRELQKLPAFKDVPPAEQENLFVQKLRQCCVLFDFVSDPLSDLKW
KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAINMFRTLPPSSNPTGAEFDPEEDEP
TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQRFVMQLLELFDSEDPRERDFLKTT
LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI
FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL
NELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAR
ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEKLKWKE
REEAWIKIENLAKSNPQFLLYIDSTSLSSPMEIETDGIGMDDVALLKKTVEEEATQIQRE
QRKERPLMRRKSELPHDMSTVKALETHRRAEDMITTRDGH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgatgccgaacaaaacaaaaaaagacaaggaatcgccgaagtctggaaaagtc
agtaaaactgcaggacaagaaaattcagatcatgagggatccaacaggaagggcagcaat
agtgtgccgcccaccacacagctgctgaaggggaagcagtctggatctcaggcccctgtc
aaaaaggagaagaggcaaagctcctctcgctttagcctcagcaataaccgggagctccag
aaacttcctgccttcaaagatgtgcccccagcggagcaggagaacctgtttgttcagaag
cttcgccagtgctgtgtgctcttcgactttgtatccgacccactgagtgacctgaaatgg
aaggaggtgaagcgggcggcgctcagtgagatggtggaatacatcacgcacaacagaaat
gtcatcactgaacccatctacccggaggtggtgcacatgtttgcaatcaacatgttcagg
acattaccgccctcatccaacccgacaggggcagaatttgacccagaggaggatgagccc
acgttagaggctgcctggccacacctgcagctcgtctatgaattcttccttcggttttta
gagtctccagacttccaaccaaacatagccaaaaagtacatcgaccagagatttgtcatg
cagctcttagaactctttgacagtgaagaccccagagaaagagacttcctgaaaaccact
ctgcatcgcatttatggcaaattcctaggcctccgggcctacatcaggaagcagattaat
aacatattctataggttcatttatgaaacggagcaccataatggaatagcagagttactt
gaaatattaggaagcataatcaatgggtttgccttaccactgaaagaagagcacaagata
ttcttgttgaaagttttgttgcctttgcataaagtcaagtctctcagtgtttaccacccg
cagctggcgtactgtgtggtacagttcttagagaaggacagcactctcactgagccggtg
gtcatggctcttctgaagtactggccgaagacccacagcccaaaggaggtgatgttcctc
aatgagcttgaggagatcctggatgtaatcgagccctccgagtttgtcaaagttatggag
cctctcttcaggcagctggcgaaatgtgtctccagtccacactttcaggttgcagagcgg
gccctgtattactggaacaacgagtacatcatgagtctgatcagtgacaatgcagccaga
atcctgcccatcatgtttccatctctttaccgcaactccaaaacccactggaacaagaca
atccatggtttgatctacaacgctttaaagctgtttatggagatgaatcagaaactcttc
gatgactgcacacagcagttcagagcagagaaaaacaaagagaagctaaagtggaaagag
cgtgaggaagcctggataaagatagaaaaccttgctaagtcaaacccccagttcctcttg
tatattgactcaaccagcttgagtagcccaatggagatcgaaacagacggcataggaatg
gatgatgtcgcactgctcaaaaagacagtagaagaagaagctacgcagattcagagggag
cagcggaaagagcggccgttaatgcgtcgcaaatcggagcttcctcatgacatgtccaca
gtaaaggctctggaaactcaccgacgtgcagaggacatgataaccacccgtgatggccac
taa
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