Ictalurus punctatus (channel catfish): 108257837 Help Entry 108257837         CDS       T04658                                  Name (RefSeq) pre-mRNA-processing factor 39   KO K13217   pre-mRNA-processing factor 39 Organism ipu  Ictalurus punctatus (channel catfish) Brite KEGG Orthology (KO) [BR:ipu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ipu03041]     108257837 Spliceosome [BR:ipu03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    Other SAPs     108257837 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_PRP39_N HAT_PRP39_C Suf HAT_Syf1_CNRKL1_N TPR_14 HAT_Syf1_CNRKL1_C TPR_19 TPR_16 ARM_TT21 TPR_MalT TPR_15 ARM_TT21_5th Apis_Csd TPR_12 Motif Other DBs NCBI-GeneID:  108257837 NCBI-ProteinID:  XP_017311409 Ensembl:  ENSIPUG00000020352 UniProt:  A0A2D0PZD5 LinkDB All DBs Position 25:complement(5169449..5180451) Genome browser AA seq 768 aa AA seqDB search MEQSDLQHSEEAMTGMVGANASDNGDATPMEDAGDGFVPDLPNLAPDAQWTMDQVPDTFA ALANQQNPEEGLLEQYSVDGHSQSAVEQKSGLSEQHDTSTYVDGNQPGTNGQAAEGHLKE SELSSEKQAETGSSDSPANMELEDGSKEGSEVGDASVSKLSLPSDFERLYKVVEDDPEDF NGWVYLLQYVEQENHLLTSRKAFDAFFLRYPYCYGYWKKYADIEKKHGCIQEADEVYRRG LQAIPLSVDLWLHYITFLKENQDTSDGEAENRMRAAYEHAVLAAGTDFRSDRLWEAYIGW ETEQNKLANVTAVYDRVLGIPTQLYSQHFQRFKDHVQNNNPKHFLSEEEFVQLRLELAAA NKPSGEGEGEEETPSEELPPGTEDLPDPAKRVTEIENMRHKVIETRQEIFNHNEHEVSKR WAFEEGIKRPYFHVKALEKTQLSNWREYLDFELENGTPERVVVLFERCLIACALYEEFWI KYAKYLESYSTEGVRHIFKKACTVHLPKKPTIHVLWAAFEEQQGNIDEARGILKSLEEAV PGLAMVRLRRVSLERRHGNLDEAEALLEDAIKNAKNTSESTFFSVKLARQFLKVQRNVGK AKNVLLEAVEKDETSPKLYLNLLELEYSGDVQQNEAEILACFDRALSSTMPLEARVTFSQ QKLSFLEDFGSDINVLVAAYEQHQKLVKEQDSTKRKAENGSQEPDSKRQRVDDGSAASGQ MMPDMQANHGGYNYNNWYQQYNSWGSQNTWGQYGQYGQYNQYYPPPPT NT seq 2307 nt NT seq  +upstreamnt  +downstreamnt atggaacaatctgatctgcaacactcagaagaggctatgactgggatggttggtgcaaat gcctctgacaacggggatgcaactcctatggaagatgcaggagatggcttcgttcctgac cttcctaacttggctcctgatgctcagtggacaatggaccaagtacctgacacttttgct gctcttgcaaatcaacagaacccagaagaaggcctgctggagcagtactcggtagatggt cattcacagtctgcagtggagcaaaaatctggcctttctgaacagcacgatacatcaacc tatgttgatggcaatcagcccggaacaaatggacaggctgcagagggtcatctcaaagag tcagagttgagctcagaaaagcaggctgaaacaggcagctcggacagcccagctaatatg gagcttgaggatgggtccaaagagggaagtgaagtgggagatgcatcagtgtcaaaactt tcgctcccctctgacttcgagaggctctataaggtggttgaggatgatcctgaggacttt aatggctgggtctacctcctgcaatatgttgaacaagagaatcacctactcacttcgaga aaggcgtttgatgccttttttctacgctatccttattgctacggatactggaagaaatat gcagacatagaaaaaaagcatggttgcatacaggaggcggatgaggtgtatcgcagaggt ctgcaagccatcccactcagtgttgatctttggcttcattatataactttcttaaaggag aaccaagacactagtgatggagaggctgagaatcgcatgcgagctgcctatgagcatgca gttcttgctgcaggtacagactttcggtcagaccgtctgtgggaagcttatattggctgg gagactgagcagaacaagttagccaatgttacagcagtttatgaccgtgtcctgggaatt cctactcagctgtactcccagcacttccagaggttcaaggatcatgtgcaaaacaataat cctaagcacttcctgtctgaagaggagtttgttcagctgagattggaacttgcagctgcc aataagcccagtggagagggagaaggagaggaggaaacccccagcgaggagctaccacca ggcacagaagaccttcctgacccagcaaagagagtcacagagatcgagaacatgcgacat aaggtgatcgagacgcgtcaagagatatttaaccacaatgaacatgaagtcagcaagcgt tgggcctttgaagaagggatcaagcgtccatatttccatgtgaaagccttggagaagact cagcttagcaactggagggagtacctggactttgagctggagaatgggacaccggagcgt gtagtggttctgtttgagcgctgcctgatcgcctgtgccctgtacgaggagttttggata aagtatgccaagtacctggagagctacagcacagagggagtgaggcacatcttcaagaaa gcatgcaccgtccacctgccgaagaagcctaccatccatgttctctgggcagcctttgag gaacagcaagggaacattgatgaggctcgaggcatcctgaagagtctggaggaggcggtt cctggtttggccatggtgagactacgtcgtgtgagccttgaacgtcgtcatgggaacttg gatgaagcggaagctcttctagaggacgccatcaagaatgcaaaaaacacaagtgaatcg accttcttctctgtgaagctggcaaggcagttcctcaaagtacagcggaatgttgggaag gctaaaaatgtattgctagaggctgttgagaaggatgagaccagtcccaagctctacctg aacctgctggagctggaatacagtggagacgtgcagcagaatgaggcagagatcttggca tgcttcgaccgggcgctcagcagcaccatgccgttagaggcgcgtgtaacattctcacag caaaaattatcgtttcttgaggactttggaagcgatataaatgtgcttgtagctgcttat gaacaacatcaaaaacttgtgaaggagcaggactccacgaagaggaaagcagaaaatggg tcacaagagccagattcaaagagacagcgcgtggatgatggctcggcagcatctggccaa atgatgccagacatgcaagctaatcatggaggatacaactataataactggtatcagcaa tacaactcctggggaagtcagaacacttggggccagtacggtcagtatggccagtataat cagtactacccaccacccccgacatga

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