Ictalurus punctatus (channel catfish): 108257846
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Entry
108257846 CDS
T04658
Symbol
rtn1b
Name
(RefSeq) reticulon-1b isoform X1
KO
K20721
reticulon-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108257846 (rtn1b)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257846 (rtn1b)
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108257846 (rtn1b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108257846 (rtn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
108257846
NCBI-ProteinID:
XP_017311425
Ensembl:
ENSIPUG00000017525
UniProt:
A0A2D0Q243
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All DBs
Position
25:complement(7271662..7321818)
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AA seq
767 aa
AA seq
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MSVKPSDEAGSEGGWYGADLENMELFGKKSSSARFEDSEREDEQKQHSHHPPHPVTMETA
STDKSDADLLKKSIIDMGDPYTSLLSSYSSQMDTSYFSGDVSGGEKKQQAGIDDLISGLD
CQSAMFSSDSGIEMTPSAELGYSSDKLRDSDKTPDSTYNYMDIRSREDPYSQQQLLEDWG
ISAASESAPLSSLRGGHYLEKSPSPVEVETLGPSAAALDSHTFPYVEEPSDDELSDYQPN
RSPGAEDSTSPVKITLTETPPLSVSPVANERASPVAVSEKESILSLGLQGVPTVTLSEPE
DESPGSSTPPLTEESDSPSDPMIPITEVKTQEKAPETFSLVSQTAPKSQSPSLELKSTPT
LPLYAKVSDASSGDSGDSEIELVSEEPSPQAPSSAYMTFSKSPSTPPPAPATTQAPVSVS
VPAFNPLPGLASAPNSAAMQYSILREEREAELDSELALESCEEESPKRFPQDSSTKVSKV
NSQPDEPPPPSATVIAAPPVNPAPPPAAPVSDDAPKEKMASEGEDEKTKPSIKPSPPTAV
LPELKVEQPPEERQAERKHSSAERHPTTPAIFQGITREKAMELLYWRDVKQTGLVFSSVL
LLLFSLTQFSVVSVVAYLALAALSATISFRVYKSVLQAVQKTDEGHPFKSYLEIEMSLSN
DQMQKYAENTQNYINNTLKELRRLFLVQDLVDSLKFAVVMWLLTYVGALFNGLTLLIMAV
VSMFTMPVVYEKYQAQIDQYVGLIRTQVNTVVGKIQEKIPGAKRKAE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaagccgagtgacgaggcaggatcagagggcgggtggtacggagcagatctg
gagaacatggagctgttcgggaagaagagcagctcggcccgcttcgaggactcggagcgc
gaggacgagcagaagcagcactcccaccatccgcctcaccccgttaccatggaaactgca
tctacagataaatcagacgcagatctcctgaagaagtccatcattgatatgggtgaccct
tacacgtccctcctgtccagttattcctcccagatggacacctcttacttctcgggcgat
gtcagtggaggggagaagaagcagcaggcaggaattgatgacctcatctcgggcctggat
tgccagtctgccatgttcagctcagactcaggtattgagatgaccccgagtgctgagctt
ggctacagctccgacaagctgcgtgactcagacaagacccccgattccacctacaactac
atggacatcaggagcagggaggatccctacagccaacagcagctcttggaggattggggg
ataagtgccgcttcagagtctgcccctctatccagcctcaggggagggcattacttggag
aagagtccctcacctgtggaagtggagacactgggcccgtctgcagctgcgcttgactca
cacactttcccctatgtagaagaaccatccgatgatgagctctctgactaccagcccaac
cgttcaccaggtgctgaggacagtaccagtccagtcaagatcaccttgacagagaccccg
cccttgtcagtctcccctgtggccaacgagcgagcctctccggtcgctgtgtctgagaaa
gagagcatcctgagcctgggactacagggagtgcccactgtcacgctgtccgagccagag
gatgagagtcctggatcttccactccaccactcacagaagagtctgactctccatccgat
ccaatgattccgatcactgaagtgaaaacccaggagaaagctccagaaactttctcactg
gtctctcagactgcacccaagtctcagagtccttccttggagcttaagagcactcccact
cttcccctgtatgccaaggtttcagatgccagcagtggagattcgggtgattcagagatt
gagcttgtgtctgaggagccaagtccacaggctcccagctctgcctacatgaccttcagc
aagagccccagcacccctccaccagcccctgcaactacccaagctcctgtttctgtctct
gtccctgcctttaaccctctccctggccttgcttctgcccccaactctgcagccatgcag
tacagcatcctacgcgaggagcgggaggctgagctggacagtgagttggccctggagtcc
tgtgaagaagagagccctaagagatttccccaggactcctccaccaaggtaagcaaagtc
aactcgcaaccggatgaacctccacccccctcagctacagtgatcgctgctccccctgtg
aaccctgctcctccacctgctgctccagtctctgacgatgctcctaaagagaagatggca
agtgagggagaggatgagaagacaaagcccagcatcaaaccttcaccccccactgcagtc
ctgcctgaactgaaggtggagcagcctcctgaggaaaggcaagcagagaggaaacattca
agcgctgaaagacaccccacaactcctgctatcttccagggaataactagagaaaaggcg
atggagctgttgtactggcgtgatgtgaagcagactggcctggtgtttagcagtgtactg
ctgctgctcttctctctgactcagttcagcgtggtcagtgtggtggcctacttagccctg
gccgctctctccgccaccatcagtttcagagtctacaagtccgtcctccaggcagtgcag
aagaccgacgaaggacacccctttaagtcatatctggagatcgagatgtccctgtcaaat
gatcagatgcagaagtatgccgagaacacccagaactacatcaacaacactctgaaggag
ctacgcaggctcttcctagtgcaggacctggtggattcactaaagttcgcagtggtcatg
tggctgctgacctacgtgggagcgctcttcaatggcctcactctcctcatcatggctgtg
gtgtccatgtttaccatgcctgtggtgtatgagaaataccaggcacagatcgaccagtat
gtgggactcataaggactcaagtaaacacggtggtggggaagatccaggagaagattcca
ggcgcgaagcgaaaggctgagtaa
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