Ictalurus punctatus (channel catfish): 108257855
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Entry
108257855 CDS
T04658
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108257855
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108257855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_DCAF12
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_SPT8
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR11_1st
TAF1C_beta-prop
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
108257855
NCBI-ProteinID:
XP_017311440
Ensembl:
ENSIPUG00000021844
UniProt:
A0A2D0Q257
LinkDB
All DBs
Position
25:3488391..3500742
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AA seq
630 aa
AA seq
DB search
MLFRFVVDRGVGKRRRNDKHGDYPLSSLLECFRCARHDEHVSYGDSGVAVPPFGCTFSTA
PGQGSMLAVANEEGIVSLYNTERRSTVLKEWLAHDNAVFDIAWVPGANNLVTASGDQTAR
LWDVISGELLGSFKGHQCSLKSVSFPTREKAVFCTGGRDGNIMLWDMRCSKKDGFYRQMK
QISGAHMKVERNTPPAKKKRATSRGMAPSVDSQRGVTAVLFRDENTLISSGAVDGMIKMW
DLRKSYTAYQQNPTPLQTYRYPGSSTRKLGYSGLTLDCTSSRLFCNCTDDNIYTFDVSGM
KTTPVAVFSGHRNSSFYVKSSVSPDDQFLASGSSDGNAYIWKISDPAQAPVMLQGHSQEV
TSVTWSPSDFTKIATCSDDNTVRIWRLSRSVGGEYSAGDLNLVGWACRKIQTPSRPSGSS
PQVDVTPVRSGRSGSDDSLLSPQPGSCAPGGADFPPPSVTSSPADAPCPPRSKTPPSIPV
VNTLGSERRAKRRLDTSEASAAGEDESDGVTELYPDRKRSRQSASAFCHPAEERTEQKEK
ERMGSDKENRSPLKADWLSAMSRKLKQSHSGAALQKSPNGVKRPDSRTPSLPALSSPPSV
KKASSPQTKTTSSPASMKKISAYFQKTPQD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcgttttgtcgtcgaccgaggagtgggtaaaagaaggcgtaacgataagcac
ggggattacccgttgtcgtctctgttggagtgtttccggtgtgcccgtcatgacgagcac
gtgtcttatggagactcgggcgtcgctgttcctccgttcggatgcacgttctccacagct
cccggacagggcagcatgctggctgtagcgaatgaggaagggatcgtgagcctttataac
accgagagacgcagcactgtactgaaagaatggctggcgcacgataacgcggtgttcgat
atcgcctgggtccccggagcaaacaacctcgtgaccgcgtcgggggatcagacggctcgg
ctgtgggacgtgatctccggggagctgctgggaagctttaaaggccatcagtgcagcctg
aagagcgtgtcctttcccacacgtgagaaagctgttttctgcaccggaggcagggacggg
aacatcatgctgtgggacatgaggtgtagtaagaaagacggcttctacaggcagatgaaa
cagattagtggagctcatatgaaggtggagcgaaacacgccgccagcgaagaaaaagcga
gctacgtcaagaggaatggctccttctgtggactctcagaggggtgtgacggctgttctg
ttccgtgacgagaacacgctcatctcgtcgggagccgtagatgggatgattaagatgtgg
gatttgagaaagagttacacggcgtaccagcagaaccccaccccactccagacctatagg
tacccgggatcctccacacgcaagctaggttattcaggcctgacgttagactgtacgagc
tccaggctgttctgcaactgcacggatgacaacatttacacgttcgacgtgagtggaatg
aaaacgacgccagtggctgtgttcagtggccaccggaactcctcgttctacgtgaagtcc
agcgtgagtccggacgatcagttcctggccagcgggtcgagtgacggcaacgcttatatc
tggaagatctctgacccagctcaggctcctgttatgcttcagggtcacagccaggaagtg
acatcagtcacctggagcccctctgattttacgaagatcgcgacctgctctgacgacaac
accgtgaggatctggaggctcagccgcagcgtcggcggagaatactcagcaggagattta
aaccttgtaggctgggcatgccgcaaaatccagacaccatcccgaccatctggctcctcc
cctcaggttgatgtaacccccgttcggagcggtaggtcaggcagcgacgactctctgtta
tcccctcagcccggctcgtgcgcccctggcggtgccgacttccctcctccatccgtcacc
tcctctcccgctgatgcaccctgcccgccccgatccaaaactccgccctccatccccgtc
gttaacacgctcggctcggagaggcgcgccaaacgccgcctggacacgagcgaggcgtca
gcggcgggggaagacgagagcgacggcgtgaccgagctctatcccgaccgtaagaggagt
cggcagtccgcgagcgctttctgccacccggcagaggaaagaaccgagcagaaggagaaa
gagaggatgggctcggataaggagaaccgctcgccgctgaaggccgactggctttccgcc
atgagccggaaactgaaacaatctcacagcggagccgcgttacagaaaagccctaatgga
gtaaagagaccagactcgaggacgccgtccctccctgcgctgagctctccgccgtctgtg
aagaaggcctcctcccctcagacgaagacaacttcctctccggcttctatgaaaaagatt
tctgcgtattttcagaaaacaccgcaagactga
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