Ictalurus punctatus (channel catfish): 108257890
Help
Entry
108257890 CDS
T04658
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF217
KO
K11977
E3 ubiquitin-protein ligase RNF217 [EC:
2.3.2.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108257890
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108257890
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108257890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR_1
IBR
IBR_2
Motif
Other DBs
NCBI-GeneID:
108257890
NCBI-ProteinID:
XP_017311504
Ensembl:
ENSIPUG00000005466
UniProt:
A0A2D0PZN0
LinkDB
All DBs
Position
25:complement(14470309..14500552)
Genome browser
AA seq
540 aa
AA seq
DB search
MGDELGCVNVASKNMLSFTASDGETGGNVSDVAVEVGTPSSDFGEQGEGETKEPSVADVL
DFQYYKNESRDKDTCRKTSPVEILRINFGIAKTSVTAADSNVETPRELDKVDSMLENLDH
RRLARNRRTRCSSSLNEGEERTSEFPDFLTSLELEDPELPVSEDTVESRSADERHQSKEH
VYCTVYCIANDNYRKTSETTLPSERGSPSPSDLSVLPPTDSSISDPDIELDHFPEPYTLS
DLADPPMLSNVLYVNNIILQCRVCLGIRSIRSLHCCKKPVCEECMKTYISSQVVSGLAEI
VCPIPECSGYLAESVVLAHLASENVAKYKYFLELGRLDSGTKTCPKCSLFTSLKGRGQPV
QSKDEPRYKIQCSKCELVWCFRCHAPWHEGLKCREYRKGDKLLRNWASVIEHGQRNAQKC
PHCKVHIQRVDGCDHMTCTQCHTNFCYRCGEQYRQLRFFGDHTSNLSVFGCKYRYLPEKP
HLRRFIRGSVCASKVLVAPVLIVLVVVIGALALVIGVVAFPIYYICKKNKHPNGIGRWLC
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgagctcggctgcgtgaatgtggcctcgaaaaacatgcttagttttaccgct
tccgacggagagaccggcggtaatgtgtcggacgtggctgtggaagttgggacgccaagc
tctgattttggagagcaaggcgaaggagagacgaaggagccaagtgtggctgatgttctg
gactttcagtactacaaaaacgaaagcagggataaagacacgtgtagaaaaacgtcaccg
gtagaaatcctaaggataaatttcggaatagctaaaacatctgtaactgctgctgacagc
aatgtggaaacccccagagagctggacaaagtcgactccatgttggagaacttggaccac
agaaggttggccaggaaccgaaggacacgatgtagctcctctctcaacgagggagaagaa
cgtacctcagagttcccggatttcttaacatccttggaattagaagatcctgaacttcct
gtttctgaagataccgttgaatccagaagtgcagatgaacgtcaccaatccaaagagcac
gtctactgcaccgtctactgtatagccaatgataactataggaaaacttcagaaaccaca
ctgccatcagagcgtggaagtccatcaccttcagatctgtctgttttacctcctacagac
tcctcgatttcggatccagatatagaactcgatcatttcccagagccgtacacgttgagc
gaccttgcagaccctccaatgttgagcaatgttctctacgtgaacaacataatattacag
tgtcgcgtgtgtcttggtatcagatccatccgttccctgcactgttgcaaaaagccggtg
tgtgaagagtgtatgaaaacgtacatcagttctcaggttgtctcaggccttgcggagatc
gtgtgtccgatcccagagtgcagcgggtacctggcggagagcgtggtgctggcccacctg
gcctctgagaatgtggctaagtataagtacttcctggaacttggcagactggactcggga
acgaagacgtgtccgaagtgtagcttgttcacttcgctgaagggacgtggccagccggtg
caaagcaaagacgaacccaggtacaagatccagtgcagtaagtgcgagttggtgtggtgt
tttagatgccacgcgccgtggcatgagggcttgaagtgccgcgagtacaggaagggagac
aagctgctgcgtaactgggccagcgttatcgagcacggccagaggaacgcccagaaatgc
ccacactgcaaggtccacatccagagggtggacggctgtgatcacatgacctgcacacaa
tgccacaccaacttctgttaccgctgcggcgaacaatatcgccagctgcgctttttcgga
gatcacacctccaacctgagcgtgttcggctgcaagtatcgctacctgcctgagaaaccg
catctgcgccgcttcatccgtggatccgtgtgtgcgagtaaagtgctggtggcgccggtg
ctcattgtcctggtggtggtgatcggagccttggctctggttataggtgtggtcgcattc
cccatttactacatctgtaagaagaataaacaccccaacggaattggacgctggttgtgc
tga
DBGET
integrated database retrieval system
