Ictalurus punctatus (channel catfish): 108257893
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Entry
108257893 CDS
T04658
Symbol
irf4b
Name
(RefSeq) interferon regulatory factor 4
KO
K09445
interferon regulatory factor 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257893 (irf4b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108257893 (irf4b)
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GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
108257893
NCBI-ProteinID:
XP_017311509
Ensembl:
ENSIPUG00000023741
UniProt:
A0A2D0PZN4
W5UGI3
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All DBs
Position
25:complement(984837..994789)
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AA seq
433 aa
AA seq
DB search
MCSDGERASLGSSGNGKLRQWLIEQVDTGKYPGLVWENEEKSVFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYREGIDKPDPPTWKTRLRCALNKSNDFEELLDRSQLDISDPYKVYR
IVPEGAKKASRALEETTSNPSPPSYPLHPSYAPLQSQVCSFISPAERNWRDYLSEKNTIA
DIPYNQNPYTSRWDTGYQFSGSFYSCSASEPLPSAFTLDASMKSAEAMALSDYRLHVAVY
FRDALVREVTVSSLEGCVLGVNKDGLPYGASQGPELVELPQIEHCSLEHGVLLWMAPDGL
YARRCCPCRVYWEGGHTSPNNKPNKLQRDQTCKLLDTQQFITELQSYARHIRPPPMSQVV
LYFDEDSTEPQRPGRTLTVQVEPLFARQLLYFTHPSSMNYIRSHNLSPLSPEHTIPPSQD
FHRIISHHHGNSL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcggatggagaacgcgcgtcgctgggcagctcgggaaacggcaagctgcgccag
tggctcatcgagcaggtggacaccggtaaatacccgggactcgtgtgggagaacgaagag
aagagcgtgttccggatcccgtggaagcacgcgggtaaacaggactacaaccgggacgag
gacgcagcgctcttcaaggcttgggcgctcttcaaaggcaaataccgggagggcatcgac
aaaccggacccacccacgtggaaaacgcgtctccgttgcgcgctgaacaagagcaacgac
ttcgaggagcttctggaccgcagtcagctcgacatttcggacccttataaagtttaccgg
atcgttcctgagggcgccaaaaaagcctccagagctctagaggaaacgacatcaaaccca
agcccgccgagttatccactacatccttcttatgcgcccctccagagtcaggtctgcagc
ttcatttctccagcagagagaaactggcgggattatctctcagaaaaaaacaccattgct
gacatcccttacaaccaaaatccatacacctctcggtgggatacaggataccagttcagt
ggatccttctatagctgcagtgcctcagaacctctgccgtctgcttttacactagatgcc
agcatgaagtccgcagaggccatggccctctcagattaccggctccatgtggcagtatat
ttccgggatgcccttgtgcgcgaggtgactgtgagcagtctagaaggttgtgttctgggt
gtgaacaaagatggcttgccatatggagcctctcaaggtccggagcttgtggagcttcca
cagattgaacactgctctctggaacatggggttctgctgtggatggcaccagatgggctg
tatgctcgccgctgctgcccctgcagggtgtactgggagggagggcacacttcgcccaac
aacaaacccaacaaactacaaagggatcagacctgcaaattactggatactcagcagttc
atcacagagttacagagctacgctcggcacatacgtcctccacccatgtcccaggtggtc
ctgtactttgacgaagacagcacagagccacagagaccaggaaggaccctcactgtccag
gtggagcctctgtttgctcgccagctcctctacttcacccacccgagcagcatgaactac
atccgcagccacaacctttcacctctgagcccagagcacacaattcccccaagtcaggac
ttccacagaatcatcagccatcaccacggcaacagcctgtaa
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