Ictalurus punctatus (channel catfish): 108257945
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Entry
108257945 CDS
T04658
Symbol
pax1b
Name
(RefSeq) paired box protein Pax-1 isoform X1
KO
K09382
paired box protein 1/9
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257945 (pax1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108257945 (pax1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_SB
Motif
Other DBs
NCBI-GeneID:
108257945
NCBI-ProteinID:
XP_017311609
Ensembl:
ENSIPUG00000006630
UniProt:
A0A2D0PZY4
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All DBs
Position
25:13524803..13531939
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AA seq
340 aa
AA seq
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MEQPSYGEVNQLGGVFVNGRPLPNAIRVRIVELAQLGIRPCDISRQLRVSHGCVSKILAR
YHETGSVLPGAIGGSKPRVTTPNVVKSIREYKRADPGMFAWEIRDRLLADAVCDKYNVPS
VSSISRILRNKIGNLSQPGQHETGCGVKPPAPPIPYSPMCAYSYPNAISPTGAKLGGPPG
VGVGLSRAWPSVHTVSNILGIRAFMDPSAIAGPDGYQQKMEEWPCVNRTSFPSHAVNGID
RSHIDTDIKYNQSPSSLSGYMPPCPYSSPSQCGVYGGNYGHHWQPQGTGLAHNDSHLHTA
MNFKSPSDVADRKPPSPLIKQQQHEALSSVHSLALPTSAS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccgtcgtacggagaggtgaatcagctgggcggcgtgtttgtgaacgggagg
cctcttcccaacgccatccgcgtgcgtatcgtggagctcgcgcagctcggtattcgcccg
tgcgacatcagccgccagctgcgcgtctctcatggctgcgtgagcaagatcctagctcgc
taccacgagactggctcagtcctgccgggagccatcggcggcagcaagccgcgcgtgacc
acacccaacgtggtgaaaagcatacgggagtataagcgcgcggacccgggcatgttcgca
tgggagattcgggaccggctgctggccgacgctgtgtgcgacaaatacaacgtgccgtcg
gtgagctccatcagtcgcattttgaggaataagattgggaatctgtcgcagcccggacag
cacgagaccggctgcggcgttaaacctcccgccccgccgattccttacagtccgatgtgt
gcttactcataccccaacgccatctcacctaccggcgcaaaactcggcggccctcctggc
gtcggggtcggcctgtcccgggcctggccttcggtgcacaccgtcagcaacatcttaggg
atacgagctttcatggacccctcagccatcgctggaccggatggatatcagcagaaaatg
gaggagtggccatgtgtgaacagaacttcatttccctcccatgcggttaatggcattgac
agatcacatatagacaccgatattaaatacaatcagtctccctcgagtcttagcggatat
atgcccccctgcccctattcttcccccagtcaatgcggggtgtacgggggaaactatggg
catcactggcagcctcagggaacaggcctggcgcataacgactcacaccttcacactgcc
atgaacttcaaatctccatcagatgtggcagacagaaaacctcccagtcctctgattaag
cagcagcagcatgaggcactgagcagcgttcacagcctggccttacccacctcagcctca
taa
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