Ictalurus punctatus (channel catfish): 108257946 Help Entry 108257946         CDS       T04658                                  Name (RefSeq) 5'-3' exoribonuclease 2   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03008   Ribosome biogenesis in eukaryotes ipu03018   RNA degradation Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     108257946   09123 Folding, sorting and degradation    03018 RNA degradation     108257946  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ipu03021]     108257946    03019 Messenger RNA biogenesis [BR:ipu03019]     108257946    03009 Ribosome biogenesis [BR:ipu03009]     108257946    03016 Transfer RNA biogenesis [BR:ipu03016]     108257946 Transcription machinery [BR:ipu03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      108257946 Messenger RNA biogenesis [BR:ipu03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      108257946 Ribosome biogenesis [BR:ipu03009]  Eukaryotic type   Pre-60S particles    RNases     108257946 Transfer RNA biogenesis [BR:ipu03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     108257946 SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N Motif Other DBs NCBI-GeneID:  108257946 NCBI-ProteinID:  XP_017311611 Ensembl:  ENSIPUG00000006639 UniProt:  A0A2D0Q1P7 LinkDB All DBs Position 25:13476982..13506335 Genome browser AA seq 965 aa AA seqDB search MGVPAFFRWLSRKYPSIIVHCVEEKSKECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIH PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR ASKEGVELAEEKKKMREEVFQRGGYLPPDEIKERFDSNCITPGTEFMDNLAKCLRYYIAD RLSNDPGWRNVTVFLSDASVPGEGEHKIMDFIRRQRGQPNHDPNTHHCLCGADADLIMLG LATHEPNFTIIREEFKPNKPRPCALCGQIGHEIKECQGVAREKKGEHDEFADTVPVSEQE FIFIRLCVLREYLERELTMASLPFPFNFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI DRLVGIYKDVVHKTGGYLTEHGFVNLERVELIMQAVGVAEDNIFKKRKEDEENFKRRSKE KKKRMKAERGPAFVTGGQFAPRALGGRDRPMPVHNARHTAYDMRMQGSNYQQNKDAASSL KAMLRNGGKDPAGPSDSTDLHGLKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKTKFDVDE TDDEFRKKVVKAYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKDMFTDFEKGT KPFKPLEQLMGVFPAASGNFLPPTWRELMSDPDSPIIDFYPEDFAIDLNGKKFAWQGVAL LPFVDERRLRAALEKVYPDLTADEVRRNSLGSDVVFVSKSHPLCDFIKELYRSESYEGTG IPPELCFGIQGALSLEEDPILPDKPVESPIPMLRDIPCSSAVLIKFKDPQYEDNYVFKAV ILPGAKIPQKVLKPGDWERSNRQPWRPQLGFNHNRQQMHLDQSAFRTLGHHVSSPQQGGQ HGPRPPRVAPTMGGQYSNAPPPSTYHQGNYRPPLRDHQHSRQQGFPRNIPPSHPPQYPQL VHGAHGWDRAMQTQVSAYQQNIQRGRGGAGGFQQHVQRPDDRRPQEGYNSRSYGLPPPAR RYNWN NT seq 2898 nt NT seq  +upstreamnt  +downstreamnt atgggtgtccctgcttttttccgttggctgagtcggaagtatccgtctataattgtacac tgcgtggaggagaagtctaaagagtgcaatggtgtccggatacctgttgatacaactaaa cccaacccaaacgaggtggagtttgataacctgtatttggacatgaatggaattatccac ccttgcacacaccccgaggacaagcctgcacccaagaatgaggatgaaatgatggttgca atttttgagtacattgaccggctcttcaacatcgttcgtccaagaagagttctttacatg gcaatcgatggtgttgctcctcgtgccaaaatgaaccagcagcgatccagacgattccgt gcctccaaagaaggagtggagctcgctgaagagaaaaagaaaatgagggaggaagttttt cagagaggtggttacctgccccctgatgaaataaaagagaggtttgacagcaactgcatc actccgggcacagagttcatggacaacttggccaaatgtttgcgctactacattgcagac agactgagcaatgatcctggatggcggaatgtcacagtctttctctctgatgctagtgtt cctggagaaggtgaacataagatcatggatttcatcaggagacagcgaggtcagcccaat catgaccctaatacacaccactgtctctgtggtgctgatgctgatcttattatgttgggt ctggcaacacacgagcccaacttcaccatcatccgagaagaattcaagcctaacaaaccc agaccatgtgcactgtgtggacagattggacatgaaattaaagagtgccagggtgtggcc agggagaagaaaggagagcatgatgagtttgctgacacagtgccagtatccgagcaggag tttatcttcattcgtttgtgcgtactacgtgagtatctggagcgagagttaaccatggcc agcctgcctttcccctttaacttcgagaggagtgttgatgactgggttttcatgtgcttc tttgtgggaaatgactttctgccccatttgccctctctagaaatcagagagggcgccatc gaccggcttgtgggtatttacaaagatgttgtgcacaagactgggggatacctcacagaa catggttttgtcaacctggagcgagtggagcttatcatgcaggctgtgggggttgctgag gacaacatattcaagaagcgcaaagaggatgaggaaaatttcaaaaggagatcaaaggaa aagaagaaacgaatgaaggcagaacggggtccggcatttgtcacaggaggtcagtttgcc cctcgtgcattgggaggacgagaccgaccgatgcctgtacacaacgctcgccatacggcc tatgatatgaggatgcagggcagtaactaccagcagaacaaagatgctgccagttcttta aaagccatgttgagaaatggtggaaaggatcctgcagggccaagcgatagtacggacctg cacggtttaaagaggaaagcagaagacagcgacagcgagccagagcctgaagataacgtc aggttgtgggaggcaggatggaagcagcggtattacaaaaccaaatttgacgtggatgag actgacgatgaatttcgtaaaaaggtggtcaaggcttatgtggagggcctttgctgggtt cttagatactactaccagggctgtgcgtcctggaagtggtactttccgttccactatgca ccatttgcatccgacttcaaagacatcaaggacatgttcacagatttcgaaaaaggcacc aagccattcaaacctctagagcagctgatgggagtgtttcctgctgccagtgggaacttc ctgcctccgacatggcgggaactgatgtcagacccggactcccccatcatcgacttctat cctgaagactttgcgattgatttgaatggaaagaagttcgcctggcagggtgttgctttg ttgccgtttgttgatgagcgcaggctgcgggcagccttggaaaaggtctatcctgactta acagcagatgaagtcagaaggaatagtctgggcagcgatgtggtttttgtctcgaaatcc caccctctgtgtgacttcatcaaggaactctatagatcagaatcttacgagggaactggg attcctccagagctgtgctttgggatccaaggtgcattatcacttgaagaagatcctatt ctaccagataaacctgtagaatctccgatccctatgctgagggatattccatgcagcagt gcagttctaattaagttcaaggatccacagtatgaagacaattatgtgttcaaagcagtc atccttcctggggcaaagattccccaaaaagtgttgaagcctggtgactgggagaggtct aatagacaaccatggagaccccaactgggctttaatcacaaccgccagcaaatgcacctg gaccagtctgccttcaggacgctgggccatcatgtcagcagtcctcaacaaggtggtcaa catggccccaggccccctcgagtcgcgccgaccatgggtgggcaatacagcaatgccccg ccccccagtacatatcaccaagggaactatcgtccacctcttcgagaccaccagcattcc aggcagcagggatttccaagaaatataccaccatctcatccaccgcagtacccacaactt gtgcacggtgctcatggatgggatcgtgcgatgcagactcaagtctctgcatatcagcag aacattcagagaggtcgtggaggagcaggtggctttcagcagcacgtgcaacgcccggat gatcgccgaccacaggagggttataattcgaggagttacggcctgcctccacctgcaagg cgctacaactggaactga

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