Ictalurus punctatus (channel catfish): 108257977
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Entry
108257977 CDS
T04658
Name
(RefSeq) DNA-binding protein RFX6
KO
K19521
regulatory factor X 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257977
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Other basic domains
RF-X
108257977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
p55_CTD
Motif
Other DBs
NCBI-GeneID:
108257977
NCBI-ProteinID:
XP_017311664
Ensembl:
ENSIPUG00000020835
UniProt:
A0A2D0Q039
LinkDB
All DBs
Position
25:complement(16041818..16058441)
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AA seq
907 aa
AA seq
DB search
MKRNRGSPVKSNNTFHQLQPPQPKRTYSADDLHHTDHHDLRNMFFKDKFDEEEEDSGIKS
EADESNGTISSEDDLDHLDYSKNFTLKQTVTKKSISEIIKDKKKQTQLTLQWLEENYIVC
EGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGI
GIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGMLLPEFPSAQHLLLHES
ISKEKVDTLIMMYKTHCQCILDNAISVNFEEIQNFLLHFWQGMPDHLLPLLENPVIVDIF
CVCDSILYKVLTDVLIPATMQDMPESLLADIRNFAKLWEPWMVSSLENLPKILSEKKLPI
ARRFVSSLKRQTSFLHLAQIARPALFDQNVVTAMVNDVDKVDLNSIGSQALLSNTGDPDL
DFYSEYDSVAVFQELKDLLRKNATVESFIEWLDSVVEQKVIKPSKQTGRSVKKRAQDFLL
KWSFFGARVMHSLTLNNAMSFGSFHLVRMLLDEYILLAIETQFNNDKEQDLQNLLDKYMR
NADASKATFTASPSSCFLANRNKAGIVNNDSSVKNETPPEYAHLSIPGTEHGLAATMLVY
QGTDTDSFTLSGQLDYSQSSGPLITPPISPAMANRGSVINQGPMAVRSPGHCPVQPHAPC
QAFPDGMYQSLPASNYCTSTSTYQPTNLTQTHTPPSAYPARNECSRYSSFSGQQLAKDCF
NSSCSGVAYSSRTSSVSYPSTSEPTIEVQGVQLMDYGFAGSAGGCSGPVYTSASHSGYYG
NSGYVDAQRMGSLIDQHVSVISSVTSTRSVPAYAEVHDPLNILNDTSRKPAAPYYPVQSP
LITRSAGSSIAPPIPCSVSPCMYGAAAQYHHTQDALLPHHSGAEVRNMVSSLPPINTVFM
GSTGGPP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaacagaggaagtccagtgaagagtaataacacgtttcatcagctacagcca
ccgcagccgaagcggacttacagtgctgatgatctccatcacaccgaccatcacgatctc
agaaacatgttcttcaaagacaagtttgatgaagaggaagaggattcagggattaaatca
gaggctgatgagagcaatggaaccatctcctctgaagacgacttagatcatctcgactat
tcgaagaatttcactctgaagcaaacggtgacaaagaagagcatcagtgaaatcatcaag
gacaagaagaaacaaactcagttaacgcttcagtggcttgaggaaaattatatcgtttgt
gaaggagtctgcttgcctcggtgcatcctctatgcgcattacctagacttctgtcgcaag
gagaaattagatcctgcttgcgctgccactttcggcaagactatacggcaaaaattccca
ctcctaacaactcgaaggctcggcaccagaggccattcgaagtatcattactatggaatc
gggattaaagagagcagtgcttattatcattcagtgtactcaggaaaagggctgaccaga
ttctctgggagcaagctcaaaaatgagggaggtttcacacgaaaatattctctcagttct
aaaacaggaatgttgctaccggaattcccaagtgcacaacatttattgcttcacgagtcc
atttcgaaagaaaaggtcgacacactgatcatgatgtacaaaactcactgccagtgtatt
ctcgacaacgccatcagtgtcaactttgaagagatccagaacttcttgctgcatttctgg
caaggcatgcccgaccatctcttacctctgctggagaatccagtaatcgtggatatcttt
tgtgtgtgtgactccatactatacaaggtcctgactgatgttctcattcctgctacaatg
caagatatgccggaaagtcttttggcagatatccgaaatttcgcaaaactctgggagccc
tggatggtttcatccttggaaaatctaccaaaaatcctgtcagaaaagaagctgccgata
gctcggcgctttgtctcctccttaaagcgccagacgtcattcttacaccttgctcagatt
gcaagaccggctctttttgatcaaaacgtcgtgacggccatggtgaacgacgttgataaa
gtagatttaaacagcatcggctcccaggctctcctctcaaacactggcgacccggacctg
gatttctactccgaatatgactctgtcgcagtgttccaagagttaaaggacctcctgaga
aaaaacgccaccgtcgagtcttttattgagtggctggactctgtggtggaacagaaagtc
attaagcccagtaaacagaccggccgctcagtgaaaaaaagagcccaagactttttactg
aaatggagtttttttggagctcgtgtgatgcacagcctcaccttaaacaacgccatgagc
tttggctccttccacctcgttcggatgctgttggatgaatatatcctgctggcaattgaa
acacagttcaataatgataaagagcaagatctacagaatctcctggataaatatatgaga
aacgcagatgccagtaaggcgacgtttacggcttccccgagttcatgcttcctggcaaat
cgtaataaagcagggattgtgaacaacgattcgtccgtgaagaacgagaccccaccagag
tatgcacatctgtctatcccaggaactgagcatggactggcggccaccatgctggtgtac
caggggacagatacggacagctttacactatctggccagttggactactcccagagcagt
ggtccgttgatcacccctcccatctctccggccatggcgaaccgaggcagcgtgatcaac
cagggcccgatggcagtgagatcgccaggccactgtcctgtccagcctcacgcaccctgc
caggctttccctgatggcatgtaccaaagcctgcctgcctccaactactgtaccagcacc
tccacctaccaacctacgaacctgacacagacccacacacccccctcggcttacccggct
cgcaacgagtgttcacgctactcctccttcagtggtcaacagctggctaaggactgcttt
aatagcagctgcagtggtgtagcgtacagctccagaacctcgtcagtaagctacccgtcc
acctccgagcccaccatcgaggttcagggggtgcagctaatggactacggatttgcagga
agtgcaggaggatgttcaggtccagtatacaccagcgcatcacacagcggctactatggg
aacagtggctatgtggatgcgcagcggatgggctctctaatcgatcagcatgtatcagtg
atcagcagtgtgacctccactcgctctgtccccgcatacgctgaggtccatgaccctctc
aacatcctgaacgacacgagcagaaagccagcagcaccttactaccccgtgcaatctcct
ctaattacacgctcagcaggttcttcgatagcccctccgatcccttgctctgtttctccg
tgcatgtatggcgctgctgctcagtatcaccatacacaagatgccttgctacctcaccat
agtggcgctgaggtgcggaacatggtgtcctccctgcctcccatcaacaccgtgttcatg
gggtcgaccggaggaccaccgtga
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