Ictalurus punctatus (channel catfish): 108257980
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Entry
108257980 CDS
T04658
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108257980
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
108257980
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Gene cluster
GFIT
Motif
Pfam:
GDPD
CBM_20
Motif
Other DBs
NCBI-GeneID:
108257980
NCBI-ProteinID:
XP_017311667
Ensembl:
ENSIPUG00000019244
UniProt:
A0A2D0Q066
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Position
25:5913444..5937232
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AA seq
687 aa
AA seq
DB search
MECIQVTLTVRGTTSLGEVIAVVGSCETLGSWCYQKALPLQPAEEDSNLWKRTITVSKGV
QISYRYFKGFFLESKMSTNSDWVAERVNAVGPCQVIVNNWETHQQPRSLSSSEVDHEIDD
GQFGFCMRCCHADGAEYVDSGWLTCQTEIRLRLHHSVKPPVSITKKEFKTSRFRLKLMLA
GIEEEDEEESPSSRHKMTTTLEISMISDGGYKSRHTQPECGYALEPAQWTEYSIHTMEPD
NLELVFEFFEEDLSKKVVQGDIHPGHVGIACLLSSSFLESGKDNGVVTLPIMSRNSRQTI
GKVRVDYLVIRPIQGFICDMNQCYTKYWRKGSALDVGHRGAGSTHAAKHHKIRENTIASF
LSAANHGAAYVEFDVHLSKDLVPIVYHDLTCCISTKKKNDKNSMVLFEVPVKDLTFDQLQ
LLKLAHSTAMKVHDHKDLQDEEEYVDEHQPFPSLSQIFQTVPDSVGFNIELKWIAQMKDG
SWDGNLSTYFNMNQFLDVILTCVLQNAGKRRIVFSCFDPDVCAMVRRKQNKYPILFLTQG
VSMVYPQLMDIRCQTTQIAMSFAQSENILGISAHTEDLLRNMDCITEAQSKGLVVFCWGD
DNNEHENRKLLREKGIDGLIYDRICEAQIEQPNIFKVEEKVSIKEVIPEETLKSCACSTY
SISCTAVPCSGEVRGGSGVSDTGLSSS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtattcaagtgacgcttactgttagaggaactacatcgcttggtgaagtgatc
gcagtagttggaagctgcgagactctcggcagttggtgttatcagaaagctctgcctcta
caacccgcagaggaggatagcaatctatggaaaaggaccatcacagtttcaaagggagta
caaatcagctatcgctattttaaggggttcttcctggaatcaaagatgtcaaccaacagt
gactgggtggctgagagagtgaatgcagttggtccatgtcaagtcatagtcaataattgg
gagacccatcagcagcctcggtcattgagttcctcagaagtggaccatgaaattgatgat
gggcagtttggattctgtatgaggtgttgccatgcagacggtgctgaatatgtggattct
ggctggttaacgtgtcagacagagatccgtctacgtctccatcactctgttaagccacca
gtgtccattaccaagaaggaattcaagacatctcgctttagattgaaattgatgctggcg
ggtattgaagaggaagatgaggaggagagcccttcgtccaggcacaagatgactaccaca
ctagagattagtatgatcagtgatggtggctataagtcccgtcatacccagccagagtgt
ggctacgccctggagccagcgcagtggactgaatacagtattcatactatggagcctgac
aaccttgagctcgtgtttgagttttttgaggaggacctaagtaaaaaagtcgttcagggt
gacatccacccaggtcatgttggcatcgcctgcctcttatcatcttcctttctggaaagt
ggcaaggataatggagtggttactctcccaatcatgagcagaaattccaggcagaccatt
ggcaaagtcagagtggactacctggttattcggcctattcaaggctttatttgtgacatg
aaccagtgttacactaagtactggagaaaggggagtgctctggatgtgggccacagagga
gcagggagcacacatgctgccaaacatcacaagatcagggaaaacacaattgcctcattt
ctaagtgctgctaatcatggtgctgcctatgtggagtttgatgtccatctgtccaaggac
ttggttccaatcgtgtaccatgatcttacatgctgtatttccacaaagaagaaaaatgac
aagaattctatggtgttgtttgaagttcctgtgaaagatctgacatttgatcagcttcag
cttcttaaacttgcccactctacagctatgaaggtgcatgatcacaaagatttacaggat
gaagaggagtatgtagatgaacatcaaccatttccttcactttctcagatctttcagacc
gttccggactctgtaggatttaatattgaactgaagtggatagcccagatgaaggatggc
tcctgggatggaaacttgtccacttacttcaacatgaaccagttcctggatgtcatcctc
acgtgtgtgctccagaatgctggaaagagaaggattgtcttctcttgctttgaccctgat
gtgtgtgcgatggtgcggcggaagcagaacaaatatcccatcctgttcctgactcagggt
gtgtctatggtctaccctcagttgatggatatacgctgtcagactacacagattgccatg
agctttgctcagagcgagaacatcctgggtatcagtgctcacactgaggatctgctacgc
aacatggactgcattacagaagcccagtctaaaggcctggtggtattctgctggggagat
gacaacaatgagcatgagaacaggaagttgctcagggagaaaggcatcgatggcctcatt
tatgacagaatctgtgaagcccagattgagcagcctaacatctttaaagtagaagagaaa
gtgtctataaaagaggtgattcctgaggagacgctgaagagttgtgcctgctccacatac
agtatttcctgcacagctgtgccttgctcaggtgaggttcgaggaggcagcggcgtgtcg
gacacgggcctcagctcatcatga
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