Ictalurus punctatus (channel catfish): 108257995
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Entry
108257995 CDS
T04658
Symbol
matn3a
Name
(RefSeq) matrilin-3a isoform X1
KO
K19467
matrilin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108257995 (matn3a)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
108257995 (matn3a)
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
Matrilin_ccoil
EGF_CA
VWA_2
EGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
108257995
NCBI-ProteinID:
XP_053531899
Ensembl:
ENSIPUG00000020073
UniProt:
A0A9F7TCI2
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All DBs
Position
25:16564230..16577744
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AA seq
502 aa
AA seq
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MKSFIGVLLSCLSFILVDISDCYNVIYPSQILAQSYAQRRNDANPSNSRLSQRTLNPAAT
DSHCRSRPLDLIFIIDSSRSVRPGEFEKVKVFLSDMVDTLDIGADATRVAVVNYASTVKI
EFLLKDHLKKGSMKHAISIIEPLAAGTMTGLAIKKAMEDAFTEQSGARPKSQNITKVAII
VTDGRPQDQVEEVSATARASGIEIYAVGVDRADMRSLKLMASNPLEDHVFYVETYGVIEK
LTSKFRETLCGVSPCKIGHSCQHICVGSGMSYYCKCRPGYVLNEDKRTCSIGRDGGRDGH
TDGAGNGHDDGDNDGESSVSFDACALGHDCQHTCVSSGSSYYCTCPPGFVLMQDKKSCFK
ASVGADDDGSASLDQCEMGHDCEHNCVSSNGSYHCECWRGFVLNEDQKNCSRLDQCGLRH
DCEHICVSSVDSYHCECRRGFVLNEDEKTCSQLKVEMVQDPCHCEARLAFQSQTLNSIQA
LNGKLADITKKVEQVERMMSRK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccttcatcggagttttactctcttgcctttcatttatcctggtggatatctcc
gactgctataatgttatttatccatcgcagattttagcccaaagttacgcacaaagaaga
aatgatgcaaatccatccaactccagattatcacaaaggacgctgaatccagcagctaca
gattctcactgtaggagccgcccgttggaccttatctttatcatagacagctctcgcagc
gtgcgtccaggtgagtttgagaaggttaaggtcttcctttcggacatggtggacactctg
gacatcggcgccgacgccactcgggtcgccgtggtgaactacgccagcactgtgaaaatc
gagttcctcctcaaagaccatctgaaaaagggaagcatgaagcatgcgatcagtatcatc
gaacccctggctgcgggcaccatgaccggtctggccatcaagaaagccatggaagatgcc
ttcaccgagcaatcaggggcacggccgaaatcacagaacatcacaaaggtggccatcatt
gttacggatgggcgtcctcaggatcaggtggaagaagtgtcggctacagcccgagcctca
gggatcgagatctacgccgtgggcgtggaccgggccgacatgcggtcgctcaagctcatg
gccagcaacccactagaagaccacgtgttctacgtagagacctacggcgtcatcgagaag
ctcacgtccaagttcagggagacgttgtgtggtgtatccccatgcaaaataggacacagc
tgtcaacacatctgtgtcggaagcggcatgtcctattactgcaagtgtcgtcccggttat
gtcttaaatgaagacaagagaacatgctccatcggcagggacggtggacgtgatggtcat
accgatggtgcaggcaatggacatgatgatggtgacaacgatggtgaaagtagcgtcagt
ttcgatgcttgtgcactgggtcatgactgtcagcacacatgtgtgagcagtggctcctcc
tattactgcacctgtcctccaggctttgtcttgatgcaggacaagaaatcttgtttcaag
gccagtgtcggtgctgatgatgacggtagtgccagtctggaccagtgtgagatgggacat
gactgtgagcacaattgtgtcagcagtaatggctcctatcactgcgaatgctggaggggc
tttgtcttgaatgaagaccagaaaaattgttcacgtctggaccagtgtgggctgagacac
gactgcgagcacatttgtgtcagcagcgttgactcctatcactgtgaatgccggagaggt
tttgtcttaaatgaagacgagaaaacttgttcacagctgaaggtggagatggttcaagat
ccgtgtcactgtgaggccagactggctttccaaagtcagacactaaactccatccaggcc
ctcaacggcaaactagcagacatcaccaagaaagtagagcaagtggaaaggatgatgtcc
cgaaagtga
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