Ictalurus punctatus (channel catfish): 108257999
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Entry
108257999 CDS
T04658
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108257999 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108257999 (fip1l1a)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108257999 (fip1l1a)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
108257999
NCBI-ProteinID:
XP_053531685
UniProt:
A0A9F7QX37
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Position
25:complement(11698210..11727396)
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AA seq
472 aa
AA seq
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MSTGETEKTTGNASVDDEDWLYGDNDDDVNDAAGDDDDKKTETEIFSALVGDVEGVNGVD
HQDADSDSDSDDNLRVTIGNIKTDIQSTSTPVNLKTSGITTVSGTKVRGVALVAVDGIIG
TPELEVDEEKPWRKPGADLSDYFNYGFNEDTWKTYCDKQRRLRMSLEFMTLGSSDKTTGS
HDEPVSKSDCSSRKLKNSIDVIGGQTETIIRVEGRRHHSTDGSSTQVPSSSERPVDAEPP
SSKPPPFFAPIIPSPPFPLLSISSTPPFIQHPPRPPMSVPPPGFPLPPEVPPLPFTSGSG
RSGGSYDGRCAPLYPFAAGVYPHALGPMTPWLGLSDRAKVWKPYSCQDKERERGKDRERT
RDREPKKEQERERDQENTPAFQSRSSDKERASRHRDHGDRERERHREHDRDGREREERHR
DRRHRERTERRKSSRSSSSRRRHSSDDGESHRRHRYKRSKRNKDSTDTESTD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggggaaacggaaaaaacgacaggcaacgctagtgtggatgacgaggattgg
ctttacggagacaacgacgatgatgtgaacgatgccgcaggtgatgatgacgataagaag
accgagactgaaattttcagtgctttggttggagatgtggaaggcgttaatggagttgat
catcaggatgcggacagcgactcggacagcgacgacaacttgcgcgttaccatcggcaac
atcaaaacagacatccagagcactagcactcctgtcaatctcaagacctcaggcataacc
accgtgtcaggcacaaaggtcagaggagtggctctggttgcagtggacggcatcattggc
actccagaactggaggtggatgaggagaagccttggagaaaaccaggtgcggacctgtca
gactattttaactacggcttcaacgaggatacctggaagacttattgtgacaaacagagg
agactgcgcatgagcctagagttcatgaccttaggctcgtctgacaaaaccacgggtagt
catgatgagccggtgtctaaatcggattgctcctccaggaagttgaaaaactccatcgat
gtaatcggagggcaaacagagaccatcattcgtgtggaagggcgaagacatcacagcaca
gatggaagcagcacgcaggtgccgtcctcctccgaaaggcccgtggatgctgagccgcca
tcctctaagccacctcctttctttgcccccatcattccttctccaccttttcctcttctc
tccatcagctccactcctccttttatacaacacccaccacgaccgcccatgagtgtcccg
ccacctggttttccacttcctcctgaagttcctcctcttccctttacatcaggcagtggc
cgttcaggaggaagctacgatggccgctgtgccccgttgtacccctttgctgcaggtgtt
tatccacatgctctggggcccatgacgccctggctgggcttgagtgaccgtgccaaagtg
tggaagccttacagctgtcaggacaaagagagggaacgcgggaaggatagggagaggacc
cgggaccgagagccgaagaaagagcaggagagagagcgcgatcaggagaacacgccggcg
tttcagagccgcagcagtgacaaagagcgtgcgtcacgtcacagggaccacggcgatcgg
gagcgagagagacatcgggaacacgatcgagacgggagagaaagagaagagcggcatcgt
gacaggagacacagggagcgtaccgagcgacgcaaatcctcacgcagcagtagcagtcgg
agaaggcattccagcgatgatggagagagccacaggagacaccgatacaagcgctccaaa
cgcaacaaggacagcacggacaccgagtccactgactga
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