Ictalurus punctatus (channel catfish): 108258003
Help
Entry
108258003 CDS
T04658
Symbol
hpcal1
Name
(RefSeq) hippocalcin-like protein 1
KO
K23847
hippocalcin-like protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108258003 (hpcal1)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
EF-hand domain-containing proteins
Calcium binding proteins
108258003 (hpcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
WEF-hand
FCaBP_EF-hand
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
108258003
NCBI-ProteinID:
XP_017311710
Ensembl:
ENSIPUG00000022844
UniProt:
W5UJ46
LinkDB
All DBs
Position
25:complement(2352724..2361977)
Genome browser
AA seq
191 aa
AA seq
DB search
MGKQNSKLRPEVLNDLRENTEFTDHELQEWYRGFLKDCPSGHLTVDEFKKIYANFFPYGD
ASKFAEHVFRTFDTNGDATIDFREFIIALSVTSRGGLEQKLRWAFSMYDLDGNGYISRAE
MLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTDNDGRLSLEEFIKGAKSDPSIV
RLLQSDQSTPR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacagaacagcaagctgcgcccggaggttctgaacgatctgcgggaaaacacc
gaattcaccgaccacgagttgcaggagtggtaccgtggcttccttaaagattgccctagc
ggccacttaaccgtggacgagttcaagaaaatctacgccaatttctttccatacggggac
gcctcgaagtttgccgaacacgtcttccgtacctttgacaccaacggcgacgcgactatc
gatttccgggagttcatcatcgcgctgagtgtgacgtcgcgtggaggtctggagcagaag
ctccgctgggctttcagcatgtacgacctggacggaaacggatacatcagccgagccgag
atgctggaaatcgtgcaggcaatttacaaaatggtgtcctctgtaatgaagatgccagag
gacgagtcgactccagagaaacgcactgacaagatctttaggcaaatggacacagacaac
gatggaaggctttccctggaggagttcatcaaaggtgccaagagcgatccctccattgtc
cgactgcttcagtctgatcagagcactccacgctag
DBGET
integrated database retrieval system