Ictalurus punctatus (channel catfish): 108258018
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Entry
108258018 CDS
T04658
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108258018
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108258018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
Motif
Other DBs
NCBI-GeneID:
108258018
NCBI-ProteinID:
XP_017311736
Ensembl:
ENSIPUG00000014508
UniProt:
W6AC90
LinkDB
All DBs
Position
25:complement(9043337..9075691)
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AA seq
1471 aa
AA seq
DB search
MARCAQSVQEFIQDSFVPMVAVLCSDDAERLSRKNSLSFPELLRPFCRLTSEGHLRDPNN
QIVVVKGLRISVTGVNTRPAHPTELHGLLSQAVSACQPPEGLAANVITAGDYDLNISDRS
VKASVPWYSDWRETLNQLSSSKYYTATTPWFEAYRESFLQSMPASEHEFLNHYVACMLVV
SSHETVPTEQFQKLSHEQHRIQHSGEYTYPKWFIPNTLKYYVLLHDISDGDEKRADSIYE
DMKQRYGTQCCYLLKINSGTGAAGPDEQMPDPWSQYLQKNHIYSSEQYEEVVVNNVGENN
INSEVDGLDTSDALSNTHPLKLDQTTDPGYPSNLREAVNSVDLDLSRSQKQTPTTSQAHG
ACLTLNDHDRIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFSATKKWFGGGK
VPEKSIAELKNTTGLLYPPEAPELQIRKMADLCFLVQHYELAYNCYHTAKKDFLSDQAML
YAAGALEMAAVSAFLQSGATRPYPAHYMETAIQTYRDVCKNMVLAERCALLSAEVLKSQA
KYSEAAALLIKMTNEDSDLRSALLLEQAAHCFINMRSPMVRKFAFHMILSGHRFSKAGQK
RHALRCYCQAMQVYKGKGWTLAEDHINFTIGRQSFTLRQPENAIAAFRHILIGDSKQSAS
QQSAFFREYLYVYRNVSQSSSESSLPQLPLPCLLCTRTRVFFGHECRLAEGEKQAATHVW
LDQEYDREQSQLWAELEEQVVAVVNKGSVPISFQPTQYCLSSHTDNLRNPLSVVEEPIIL
EVVFKNPLKVPLALSELSVLWKFTLKDFSGPQGGTIGETITNENEAPTSKATALNDLIST
EVIPEFLMSPEETKVARLKLLPHKTGQLHVLGVVYNLGTGEDDNTGEAASRLMCVRGRQD
LEIQGPRLNMTKEEKTSVQHGSDRRLEPIITPPMPLLEVFFINFPTGLLCGEIRKAWVEF
VNVSAVPLTGLRVVSTHPEFFTFGSATSDLTPVTPTAAEHCSAYKTIVTPPSVAAVTLVS
PASFGVTGEDRLKVAEIHLTGGVLGPGEALQIPLWLRGPDREGVHEIHFLFYYESVEKNA
KLSHRVLRHTAVICASRSLSARVTACRSNTLPGKVRREEREEECYGSMLVFVDVENINTS
EAGVREFHIVQVSSSSRQWRLHKCINPAGDKDSKLGSRERGKLCFRATRCRTQEATSDTI
EKYTFADLNLGNEQIVSSMTPCADFFFRRGPPSEPRKGGVSPGGAMHMRRQSLTPAGRTD
DCITSVIRKCSEVELDIIILWKAYVVEDNKQLILEGQLHVALQTIGKEACSLAQKEEAQE
MVLLKFKPDPPPPVSRPSLEQLSHLIKTCLHYPESYDHPFPQKSLCMVPVTLTLSNCSLA
QVDVIIDLRQKTTSPESLEVHGAFTWLGQTQYKLQLRPQEVHQLFLKACFFQAGVYNLGT
PRVFAKLAQSGTMCETSQQSAMPALIIINSV
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtgtgcccagtccgtgcaggagttcatccaggactcgttcgtgcctatggtg
gcggtgctgtgcagtgacgacgccgagagactgagccgcaaaaacagcctgagtttcccc
gagctgctgcggcctttctgccgactgacctcggaaggtcacctgcgtgaccccaataac
cagatcgtggtggtgaaggggctgaggatcagcgtgaccggagtgaacactcggccagca
caccccaccgagctgcatggactcctgagccaggccgtgtcagcctgtcagcctcccgaa
ggactcgctgctaatgtcatcactgctggagactacgacctcaacatcagcgaccgctcg
gtcaaagctagcgttccctggtactctgactggagagaaacgctcaaccagctcagctcc
tccaaatactatacagcaacaacgccatggtttgaagcatacagagagagttttctacag
tccatgcctgcgtcggagcacgagttcctcaaccactatgtggcctgtatgttggtggta
tcgtctcatgaaaccgtgcccaccgagcagtttcagaagctctctcatgagcagcacagg
atccagcacagtggagagtacacctaccccaaatggtttatccccaacaccctcaaatac
tacgtcctgcttcacgacatcagtgatggagacgaaaagagggcagactccatatatgag
gacatgaagcagaggtacggtactcagtgctgttacctgttgaagatcaactctggaact
ggtgctgctgggccagatgagcaaatgccagatccctggagtcagtatttacagaagaac
cacatctacagctctgagcaatacgaagaagttgtggtgaataatgttggggagaacaac
attaactctgaagtggatggacttgacacttcagatgcactcagcaacacccatccattg
aaactggaccagacaactgacccaggttatccctccaacctccgcgaggctgtgaacagt
gtggacctggatctgtcgaggtcacagaaacagacccccacaacatcacaggctcatggt
gcctgcctaaccctcaacgaccatgaccgcatccgccagttcatccaggagttcaccttc
agaggactgttgccacacatcgagaaaaacatccgccagctcaatgaccagttggtgtca
aggaaagggttaagtaggtctctgttctcagctacaaagaagtggtttgggggtggcaag
gttccagagaagagcattgctgaactaaaaaatactacaggactgctataccccccagaa
gcccctgagctgcaaattaggaagatggctgacctgtgctttctggttcaacactatgag
ttggcctacaactgctaccacactgccaagaaggacttcctctctgaccaggccatgctg
tatgctgctggagcactggagatggctgcggtatctgcgtttctacagagtggagccacc
aggccgtaccctgcccactacatggagacagccatccaaacttatcgagatgtctgcaaa
aacatggtcctggctgagcgctgtgctctgttgagtgctgaggtgctgaagagtcaggcc
aaatactccgaagctgcagctctcctcatcaagatgaccaatgaggactctgatctgcgg
agtgcgctcttattggagcaggcagctcactgcttcattaatatgcgcagccccatggtg
aggaagtttgccttccacatgatcctgtcaggtcaccgtttcagcaaagccggacagaag
agacatgcgttgcggtgttactgtcaggccatgcaggtgtataaagggaagggctggact
cttgctgaagatcacatcaacttcaccatcggccgacagtccttcactctgcgccagcct
gagaacgctatagccgccttccggcacattctcatcggcgacagcaaacagtccgcctct
cagcagagcgccttcttcagggaatatctttatgtgtacaggaatgtgagtcagtcatcc
agtgagagctctctgcctcagctgcccctgccctgcttactctgcacccggacacgtgtg
ttctttggccatgagtgcagacttgccgagggggaaaagcaagcagccacccatgtgtgg
ctggatcaggaatacgaccgagaacagtcacagctgtgggcggagctggaagagcaggta
gtggctgtggtcaacaagggcagcgtgcccatcagcttccagcccacacaatactgcctc
agcagccacacggataacctgcgcaaccccctctctgtagtggaagagcccattatcctg
gaggtagtgttcaaaaatcctctgaaggttccactggctttgtccgagctctctgtgctg
tggaagttcacattgaaggacttttctgggcctcaaggaggcacgatcggagaaaccatc
actaatgaaaatgaggcacccacaagcaaagccacagcacttaatgaccttatcagcact
gaagtcattccagagttccttatgagtcctgaagaaacaaaagtggctcggctgaagtta
cttcctcataaaacaggacaactgcatgtgctcggtgtggtctacaacctgggcactgga
gaggacgacaataccggtgaagcagccagtcgtttgatgtgtgtccgtgggaggcaggat
ctggaaatccaggggccgagactgaacatgaccaaagaggagaagacctccgtccaacac
ggatcagaccgtcgccttgaaccgatcatcactccgccgatgcccctgctggaggtgttt
ttcattaacttccccacgggtttgctctgcggcgagatcagaaaagcgtgggtggagttt
gtcaacgtgagcgccgttcccctcaccggcctgcgggtggtgtcaacccacccagagttc
ttcacctttggaagtgcgacctctgacctcaccccagtaacccccacagccgccgaacac
tgctccgcctacaagacaatagttacgcccccgtctgtggccgcagtgactctggtatct
cctgcatcgtttggcgtgactggggaagaccggctcaaagtagctgagattcatttaaca
ggaggagttctgggacccggcgaggcactacagataccactgtggctcagaggacctgac
cgagagggtgtgcacgagatccacttcctgttttactatgagagtgtggagaaaaatgcg
aagctcagtcaccgggtgctgcgccacacagccgtcatctgcgcgagtcgttccctgagc
gcgagagtgacggcgtgtcgcagtaacacgctgccaggaaaagtcaggagagaggaaagg
gaggaggagtgctacggcagcatgctggtgttcgtggatgtggaaaacatcaacactagt
gaagcaggggtgcgcgagttccacatagtgcaggtgtccagcagcagcagacagtggagg
ctacacaagtgcatcaatcctgccggagacaaagactctaagctgggcagcagagagagg
gggaagctgtgcttcagggcaactagatgcagaacacaggaagctacctcagacacaata
gagaagtacacttttgctgacctaaaccttggcaatgaacagattgtcagttctatgact
ccatgtgcggacttctttttccggagaggtccgccctctgagcccaggaaaggaggcgtg
tctccaggtggagccatgcacatgaggaggcagagcctcacgcctgctggcaggacggat
gactgcattacaagtgtcattcggaaatgcagcgaagtggaactcgacatcatcatcctt
tggaaggcctatgttgtggaggacaacaagcagctcattctagagggacaactacatgtt
gctttgcaaactattggaaaggaggcatgctccctcgcccagaaagaggaagcgcaggag
atggtgctgctaaagttcaagcctgatcctccacctcctgttagcagaccctcactggaa
cagctttcccatctcatcaagacttgtctgcactaccctgagtcctatgaccaccctttc
ccacagaaaagcttatgcatggtaccggttaccttgactctgtccaactgttccttggct
caggtggatgtcatcattgacctgcgtcagaaaacaacgagccctgagtcactagaggtg
cacggtgcgtttacatggctggggcagacccagtacaagctgcagctgaggccgcaggaa
gtccaccagctctttctgaaagcctgcttcttccaggctggggtttataacctgggcacg
ccgcgggtctttgccaagctcgctcagtcaggcaccatgtgtgagaccagccagcagagc
gcaatgccagctctcatcatcattaacagtgtgtga
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integrated database retrieval system
