Ictalurus punctatus (channel catfish): 108258020
Help
Entry
108258020 CDS
T04658
Name
(RefSeq) tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108258020
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108258020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gcd10p
RPN2_C
Motif
Other DBs
NCBI-GeneID:
108258020
NCBI-ProteinID:
XP_017311740
Ensembl:
ENSIPUG00000019365
UniProt:
A0A2D0Q307
LinkDB
All DBs
Position
25:5883499..5896379
Genome browser
AA seq
457 aa
AA seq
DB search
MADSLVDVECRISEGDYVVLKRGDVYKSVQVQTKKKIIFEKQWIFLDAAIGELYGSTFEV
DAGGKLGLRKPKNTEDDSTEAKEAGQDNRHIVDDGKSQKLTRDDIESLKGQGMKGQEIIQ
QLINNSTTFRDKTEFAQEKYIKKKKKKYESKITVLKPTSRILAMMYHGREPGKVCHLRYD
TLAQMLTLGNIHAGSKIIVFETCAGLVLGSVMERMGGHGSVIQMYPGGGPVRAGMESFGF
PSHFHDTLNEFPLCKVNALLSGTLNVDEKDRDSGKSEEQPAAPSSGGSESQSMEVSTDPA
EAKKIEERERLREQRAQEKKVRMEEKRKRLAAAAALLEGRNADGLVIASRFHPCPVLLGL
LRFVAPSRPFVVYCQYREPLIECYTKLREQGGAINLKLTDSWLRHYQVLPNRTHPVLLMS
GGGGYLLSGITVSADAATSGAPRKTGEPAAKRIKLDD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcgctggtggatgtagagtgccgaataagtgagggagattacgtggttttg
aaaagaggagatgtctacaaatccgtgcaggtgcagacgaagaagaaaatcatatttgag
aagcagtggatctttttggatgctgccatcggggaactgtacggctcgacttttgaagtg
gacgctggaggaaaactaggtctacgaaagccaaaaaacaccgaagacgactccacagag
gccaaagaagcaggccaagataacagacacatcgtagatgatggcaaatcacagaaactg
accagagatgatatcgaatcgctgaaagggcaggggatgaagggccaggaaataattcag
cagctcataaacaacagtacaacattcagggataaaactgaatttgctcaggagaagtac
atcaagaagaaaaagaagaagtatgagagcaagatcacagtactgaagcctacctcccgt
atactggcaatgatgtaccatggcagagaacctggaaaagtatgtcacctgagatatgac
actttggctcaaatgctgactctggggaacattcatgcaggaagtaagatcatcgtgttt
gagacatgcgctggactcgtcctcggttctgtcatggagagaatgggaggtcatggctca
gtgatccagatgtatccaggtggtggacccgtcagagcaggcatggagagctttggcttc
ccttcacacttccacgatacgttaaacgaatttccattgtgtaaggtgaacgcgctgctg
tcaggaacactgaacgttgacgagaaagacagggattccggaaagtcagaagaacagcct
gctgcaccttcctcaggcggctctgagtcacagagcatggaggtgagcacagacccagcc
gaggccaagaagattgaggagagagagaggctgcgtgagcaaagggcacaagagaagaag
gtaaggatggaggagaagaggaagaggctggctgccgccgctgcgctgctggaggggcga
aacgcagacgggttagtgatcgccagccgcttccacccttgtcctgtgctgctgggttta
ctccgatttgtggcaccatccagaccatttgtagtgtattgccagtacagagagccgtta
attgaatgttacacaaagctcagggagcagggtggagccattaatctcaaattgacagat
tcctggctcaggcattaccaggtgttgcccaatagaactcatccagtgttgttgatgagt
ggaggtggaggatacctgctgtctggaatcacagtctctgcagatgctgccacatcagga
gctccacggaaaaccggcgagccagctgccaagaggatcaagctagatgattag
DBGET
integrated database retrieval system
