Ictalurus punctatus (channel catfish): 108258033
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Entry
108258033 CDS
T04658
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03410
Base excision repair
ipu04210
Apoptosis
ipu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108258033
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108258033
04217 Necroptosis
108258033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108258033
03036 Chromosome and associated proteins [BR:
ipu03036
]
108258033
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108258033
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
108258033
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108258033
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108258033
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108258033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
108258033
NCBI-ProteinID:
XP_053531642
Ensembl:
ENSIPUG00000020250
UniProt:
A0A9F7RA89
LinkDB
All DBs
Position
25:16500248..16524894
Genome browser
AA seq
1018 aa
AA seq
DB search
MADAQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTSDISGFTDLRWEDQEKVKKAIESGGSVGGKAERKGAGKGEKSLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKSVDPEKPQLGLIDRWYHTGCFVSRREELAFKPEYSAAQ
LKGFAALRAEDQDELKKRLPTVKTEGKKKADSVDGASKKQEEEKKQLEIRLKEQSQLIWG
IKDKLKKYCSANDMKELLIANGQDVPSGESNILDRLSDCMAFGSLKPCETCQGQLVFKSD
AYYCTGDISAWTKCVFKTQTPSRKDWVTPKEFHEIPFLKKFKFKRQDRVFPKEPPAAPAA
APASSAAASASASAASSTSGSGFPTELPTEVPTDKPLTGLKVLAVGKLSKNKDELKAAVE
ELGGKITSTVNKATFCLSSRKEVEKMSKKMEEVRDAGVRVVAEDFLTDIKSSGKALRELI
SLHGISPWGAEVKLEAQASSVAAKSSRASKSSGRSKEDEGGSKAKKMKLTVKGGAAVDPD
SGLEDCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTKI
GGNKLEKFYDKNSAMDNFRSMYEEKTGNCWTSSSFTKYPNKFYPLEIDYGQDEEAVKKLT
ASSGTKSQLAKPVQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEV
QQAVSDNASEALILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYS
LLRGGAEDNKKDPIDLNYEKLKTTIEVVDKSSEEAQVIQQYVKNTHAATHNTYTLEVEEI
FKIAREGEYQRYRAFKDLHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGLY
FADMVSKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRTAP
EPGATVSLNGVDVPLGKGANTNIDDTSLLYNEYIVYDVAQVNLKYLLKLRFNYQTSLW
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcacaggacgacaagctttacaaagccgagtatgcgaaaagtggacgcgct
tcgtgtaagaaatgtaaagaaaacattgcgaaggactcgctgaggatggccatcatggtg
cagtcgcccatgtttgatgggaaagtgccgcactggcatcacttctcctgcttctggctc
cgcgcggccgcgcagtccacgtccgacatctcgggcttcaccgatctccgctgggaggac
caggagaaagtgaagaaagccatcgaaagcggagggtctgtcggaggtaaagctgagcgt
aaaggagcaggtaaaggggagaagtctctgaatgacttcgcagtggagtacgcgaaatcc
aaccggagcacctgcaaaggctgtgaccagaaaatagaaaaggaccagatccgcgtttcg
aagaaatcggtggacccggagaagcctcagctgggtctgatcgaccgctggtaccacacg
ggctgcttcgtgagccggcgcgaggagctggcgttcaaacccgagtacagcgcggctcag
ctcaaaggcttcgccgctctgcgtgccgaggaccaggacgagctgaagaagagactccct
actgtcaagactgaggggaagaagaaagccgactctgttgatggagcttctaagaagcag
gaagaggagaaaaaacaactggagatcaggctgaaggagcagagccagttgatttgggga
attaaagacaagctgaagaaatactgttcggccaatgacatgaaagagcttctgatcgct
aacggccaggacgttccctcaggagaatctaacatcctcgaccgcctgtcggactgcatg
gctttcggatcgttgaagccctgcgagacgtgtcagggtcagctcgtgttcaagagcgac
gcctactactgcacaggagacatctctgcctggacgaagtgcgtgttcaagacgcagacc
cccagccggaaagactgggtcactcccaaggagtttcatgaaattcccttcctgaagaag
tttaagtttaagcgtcaggaccgcgttttccccaaagagcctcccgctgctcctgccgct
gctcctgcgtcgtccgcggccgcttcggcttctgcctccgctgcttccagcacctccggc
tccggttttcccaccgagctccctacagaagtgcccacagataagcctctgaccgggctg
aaggtgctggctgtggggaagctgagtaagaacaaggacgagctgaaggctgcagtggag
gagctgggaggaaaaatcaccagcactgttaataaagcaacgttctgcctcagctccagg
aaggaagtcgaaaagatgagtaagaagatggaggaggtgagggacgccggcgtgcgtgtc
gtcgccgaagatttcctcaccgatatcaagtcctcggggaaggcactacgagagctcatc
tccctgcacggcatctcaccctggggcgccgaggtcaaactcgaggcccaggcttcgtcg
gtggccgcgaagtccagcagagcctccaagagctccgggagaagcaaagaggacgagggt
ggcagtaaggcgaagaagatgaagcttacggttaaaggtggagcagcagttgatccggac
tcaggtctggaggactgcgctcacgtgctggatcagaacgggaagatctacagcgctaca
ctggggctggtggacatcgtccgcggaacaaactcctactacaaactccagcttctggag
gacgacgtacagaaacggtactgggtgttcaggtcctggggtcgagtaggaaccaagatc
ggaggaaacaaactggagaagttttatgacaagaactcggccatggataacttccgcagc
atgtacgaggaaaaaaccggcaactgctggacctcgagcagcttcaccaaatatcccaac
aagttttaccctctcgagattgattatgggcaggatgaggaagcagtgaagaagctgaca
gccagcagcggcaccaagtctcaactcgccaaaccggtacaagagctcatccgcatgatc
ttcgacgtggagagcatgaagaaggccatggtggagtttgagatcgacctgcagaagatg
cctctggggaaactgagtaagagacagatacagagtgcatactctctcctgactgaggtc
cagcaggctgtatccgataacgcctccgaggctctgattctggacctgtccaatcgtttc
tacactctgataccacacgacttcggcatgaagaagcctccgctgctgagtaacttggac
tacattcaggctaaagtgcagatgctggacaacctgctggacatcgaggtggcgtacagt
ctcctgcgcggcggagctgaggacaacaagaaagacccgattgacctcaactacgagaaa
ctcaaaaccacgatcgaggtggtggataaatcatcagaagaagctcaggttattcagcag
tatgtgaagaacacgcacgctgcaacgcataacacctacacactcgaagtagaagagatc
tttaagatcgccagagaaggtgagtaccagcgttaccgcgccttcaaagatttacacaac
cgccagctcctgtggcacggctcacgcacaaccaactacgctggcatcctgtctcagggt
ctgcgcatcgccccgcccgaggctcctgtgaccggttatatgtttggtaaaggtttatat
ttcgctgacatggtgtctaagagcgcaaactactgccacacgtcccaagcggatcccgta
ggcctcatcctgttaggagaagtcgctctcggcaacatgcatgaacttaaaaaggcttca
cacatcacaaaactgccgaaagggaaacacagtgtgaagggtttgggaaggaccgccccc
gaacctggcgctaccgtctctcttaacggagtggacgtgccgctgggcaaaggcgccaac
acgaacatcgatgacacgagtctgctttacaacgagtatattgtgtacgacgttgctcag
gtgaatctgaaataccttctgaaactccgcttcaattatcagacgtccctctggtga
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integrated database retrieval system
