Ictalurus punctatus (channel catfish): 108258104
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Entry
108258104 CDS
T04658
Name
(RefSeq) xylosyltransferase 2 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ipu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ipu01100
Metabolic pathways
Module
ipu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108258104
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108258104
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108258104
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
108258104
Glycosyltransferases [BR:
ipu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
108258104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
108258104
NCBI-ProteinID:
XP_017311979
Ensembl:
ENSIPUG00000009255
UniProt:
A0A2D0Q104
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Position
2:24900673..24933557
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AA seq
864 aa
AA seq
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MVASTRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERRERRSKLPDHNNQDV
RRDSEARGQNALSGGYHGWGRKHDMERSVVTRPLRKGGKRRPKPSRIETQGVGAVDAVAP
YDPSSSRNFTDTKGQEGGKFPPGAQGEPGSVDGAPQVPSNDFVPSCEIVGKDALSALHRA
GSRQCRQEIANIVCKHQAGELMPQALPQYCTQHVLSSAGQQADIIDSDLSKVENPVRVAF
VLMVHGRAVRQLKRLLKAIYHKDHFYYIHVDKRSNYLHREVVHMAELYSNVRATPWRMVT
IWGGASLLKAYLRCMQDLLSMLDWKWDYFINLSATDFPTRTNDELVAFLSQNRDKNFLKS
HGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDWFSLTRRFVEYVVSSK
DELVTGLKQFYTYALLPAESFFHTVLGNSHMCDTLVDNNLRVTNWNRKLGCKCQYKHIVD
WCGCSPNDFKPADLIRIQQLTRPTFFARKFESTVNQEAIDILDSHLYGHYPPGTAALKAY
WESLFEREEGVGTLSDVALTAYMSFFRLGLISQKIMHEACRFVPVGYPVSVLLYFYDDRF
QGYLVRQEAKSMASGKKEMLEVWVVPQATLQLESNLNEFERLKNLEVGTEWDPKERIFRN
FGGVMGPLDEPVAVQKWARGPNLTATIVWIDPAQVVAASYDISVDVEAEFTQYKPPLQRP
LRPGAWTVRVLKLWERVAEAHFLVMPLAFKGKEPFRKEEHSWLHAGPAGNIYLDQGFQQL
AQVLKLPSMESALEESQKKASLVGKALEGWVDSLVGAFWVTGGMCSTQTSLCPSVQLCAK
TSWSSLSPDPKSELGAVKSNGRIR
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgagcactcgtgtacaaaagctgctccgtcgatacaaactcgccatcgccgcc
gctttaacaattctcctgatccaaggtttggtggtatggagtctccggagtctggaggaa
ggagaggccgagcgcagggagcggcgatctaagctgcctgatcacaacaaccaggatgtg
aggagagactcagaagccagggggcagaacgccctgtctggtggttaccatggctggggg
aggaagcatgacatggagcggtctgttgtcactcgtcccctcaggaaagggggaaagcga
agaccgaagccctccaggatagaaacgcagggcgttggagctgtagatgccgtcgccccg
tacgatccatccagcagccgtaacttcactgatacgaaggggcaggaaggaggaaaattt
ccacccggtgctcaaggagaaccagggagcgtcgatggcgcaccccaggtcccaagcaat
gactttgtgcccagctgtgagatcgttgggaaggacgctttgtcggcgctgcaccgtgct
ggatcacgccagtgccggcaggagatcgccaacatcgtgtgcaaacaccaggctggagag
ctaatgccacaggctttacctcagtactgcacacagcatgtcctgtccagtgccggccag
caagctgacattatagacagcgatttgtccaaagtggagaacccagtaagggtggcattc
gtgctgatggttcacggtcgcgccgtgcggcagctgaaacggctcctcaaagccatttat
cacaaagaccatttctactacatccatgtggataaacgctccaactacctgcatcgtgaa
gttgtgcacatggctgagctttactccaacgtgagggccaccccctggcgcatggtcact
atctggggtggggccagtctgctaaaggcctacttgcgctgcatgcaggacctgctgtcc
atgctcgactggaaatgggactacttcatcaacctcagtgccacagacttccccaccagg
accaacgatgagctggtggctttcctctcacagaaccgtgacaagaacttcttgaagtct
catggcagagagaatgcaaggttcattaagaaacaggggctggacagactcttccacgag
tgtgataatcacatgtggcggctgggcgagcgcaccatcccagagggcctggaggtgtct
ggtggctccgactggttttcactcacgcgccgctttgtggagtatgtggtcagctccaag
gacgagctggtcactgggctgaagcagttctacacctacgccctgctccctgctgagtct
ttctttcacacagtgttgggcaacagccacatgtgcgacacgctagtggacaacaacctg
cgagttactaactggaaccgcaagctgggctgcaagtgccagtacaagcatatagtggac
tggtgcggatgctctcccaatgacttcaaacctgccgatctcatccgaattcagcagctg
acacggcccacgttcttcgcccgcaaatttgaatccacagtcaaccaggaggccattgat
attcttgatagccacctgtatgggcactaccctccaggcactgcggcactcaaggcctat
tgggaaagcctgtttgagcgggaggaaggtgtgggtactctcagcgacgtggcactcaca
gcctatatgtctttcttcagacttggtctcatcagtcagaaaatcatgcatgaggcctgc
aggtttgtgcctgttggataccccgtatctgtcctcctctatttctatgatgaccgtttc
cagggttacctggtgcgccaggaggcgaagagcatggcatctgggaagaaggaaatgctg
gaggtgtgggttgtacctcaggccacactacagctagagagcaacctgaatgagtttgag
aggctaaagaaccttgaggtgggaacagagtgggatcccaaggagagaattttccggaac
tttggtggcgtgatgggccctttggacgagccagtggcggtgcagaaatgggctcgtggc
cccaacctcacagccaccatagtgtggattgatcctgctcaggtggtagcagcgtcttac
gacatcagcgtggatgtagaggcggagtttacacagtacaagccgccgctgcagcgtcct
ctcaggccgggagcatggacggtccgtgtgctgaagctatgggagcgtgtggccgaagct
cactttctggtcatgcctctggcttttaaaggaaaggagccgtttcgcaaagaggaacac
agctggctgcacgcaggtcctgcaggcaacatttacctggaccagggcttccagcagctt
gctcaagttctgaagctgccttccatggagtctgccctggaagagtctcagaagaaggcc
tctctggtgggcaaggctctggagggttgggtggacagcttagtgggtgccttctgggta
actggaggtatgtgttccactcagacctccctctgtcccagcgtacagctgtgtgccaag
actagctggagctctttgtccccagatcctaaatctgaacttggtgcggtcaaaagcaac
ggccgcatcaggtag
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