Ictalurus punctatus (channel catfish): 108258120
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Entry
108258120 CDS
T04658
Symbol
gcdhb
Name
(RefSeq) glutaryl-CoA dehydrogenase b
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00071
Fatty acid degradation
ipu00310
Lysine degradation
ipu00380
Tryptophan metabolism
ipu01100
Metabolic pathways
Module
ipu_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108258120 (gcdhb)
09105 Amino acid metabolism
00310 Lysine degradation
108258120 (gcdhb)
00380 Tryptophan metabolism
108258120 (gcdhb)
Enzymes [BR:
ipu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
108258120 (gcdhb)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
CLIP
Motif
Other DBs
NCBI-GeneID:
108258120
NCBI-ProteinID:
XP_017312016
Ensembl:
ENSIPUG00000007469
UniProt:
W5U9Z9
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Position
2:complement(25798886..25808009)
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AA seq
441 aa
AA seq
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MALRRVCCLLGRPQRCVFTSGLRAQGTVAQAQREAEKRGEKKQVKAPKVQFNWRDSLDLE
SLLTEEEIMIRDTFHTYCQEKLMPRILLANRNEVFHREILNEMGELGILGPTIKGYGCAG
TSYVAYGLIAREVERVDSGYRSVMSVQSSLVMHPINAYGTEEQKEKYLPRLARGEILGCF
GLTEPNHGSDPGSMETRAKYNPSSRSFSLTGSKTWITNSPVADICVVWAKCDDNKIRGFI
LERGMKGLSTPKIEGKFSLRASSTGMIIMDDVDVPEENLLPNVSGLGGPFGCLNNARYGI
AWGALGAAEFCFHAARQYTLDRIQFGVPLARNQLMQKKMADMLTEITIALQSCLQLGRLI
DQKKASPEMISMLKRNSCGKALDIARQARDMLGGNGIADEYHIIRHVMNLEAVNTYEGTH
DIHALILGRAITGLQAFTVEK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcattaagaagagtgtgttgcctacttggcaggccacagagatgtgtgttcacttca
gggttaagagctcagggcactgtagcacaggctcagagagaggcagagaagcgtggcgag
aagaaacaagtcaaagcaccaaaagtacagtttaactggcgtgattccctcgacctggag
agtctgctgacggaggaggagatcatgatccgggacaccttccacacctactgtcaagag
aaactcatgccacgcatcctgctggccaacagaaatgaagttttccatcgggagattttg
aatgagatgggtgagcttggaattctaggcccaaccattaaaggctacggctgtgctgga
acgagttacgtggcgtatggactaattgcacgcgaggtggagagagtggacagcggatac
cgctcagtgatgagtgtgcagtcctctctggtcatgcacccaatcaacgcttatggcaca
gaggagcagaaggagaaatatctccccagactggcacggggagagattctgggctgcttt
ggcctgactgagcccaaccatggcagcgatcccggtagcatggagaccagagccaagtac
aacccatccagccgcagcttcagcctcacggggtccaaaacatggatcacaaactctcct
gtggctgatatttgtgtggtgtgggccaagtgtgacgataataaaatacgtggttttatc
ctggagcgaggcatgaaaggtctcagcacccccaaaatcgagggcaagttctcgctgcgc
gcctcttccaccggcatgatcatcatggacgacgtggacgtgccagaggaaaacctgtta
cccaacgtgtctggactcgggggtccatttggctgcttaaacaacgctcgctatgggatc
gcctggggagcgttaggagcagcagagttctgcttccatgcagcacgtcagtacacactg
gacaggatccagtttggggtgccattggccagaaaccagctgatgcagaagaagatggca
gacatgctaacggagattacaatcgccctgcagtcctgtctgcagctgggcaggcttatc
gatcagaagaaagcaagtccagagatgatctccatgcttaagaggaatagctgtgggaag
gcgttggacattgccagacaggcacgagacatgctgggtggcaacggcatcgctgatgaa
taccacatcattcgccatgtcatgaacttagaggccgtcaacacatatgaaggtactcat
gatatccatgctctgatcctgggcagagccatcacaggcctgcaggcgtttactgtggag
aagtaa
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