Ictalurus punctatus (channel catfish): 108258123
Help
Entry
108258123 CDS
T04658
Name
(RefSeq) protein broad-minded isoform X1
KO
K28444
TBC1 domain family member 32
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108258123
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108258123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BROMI
BROMI_C
BROMI_N
RabGap-TBC_2
RabGAP-TBC
DUF3402
Motif
Other DBs
NCBI-GeneID:
108258123
NCBI-ProteinID:
XP_017312015
Ensembl:
ENSIPUG00000021141
UniProt:
A0A2D0Q3S5
LinkDB
All DBs
Position
25:15091535..15143269
Genome browser
AA seq
1305 aa
AA seq
DB search
MSQFFSSEDEAELQSLLRQLLKSVRERITNAPSVECAEEILLHLEETDKNFHNYEFVKYL
RQYVESSLGAVIEEETESCSRGDGHGVGSGQDTLVHAVTRRTRESAQYKQMMQTLKQTMT
VIVESLLNKFEEDQLKKEETSGTNQRDQSSCHYTDNCSDSDSSFNQSYGFIKQEQLQVIS
EKLDPSRPREVRWEALQLLCCAPPSDVLSCESWTGLRRNLSAALADPDPDLSDKVLRFFA
KTFSTSPLNVTREIYTSLVKSLESDFLYHKLSFPSESALMDVNRPDITRLLKQIRLMNDF
QKEVTTFWIRHPEKYMEEIIESTLALLSLHPEHGVSAHGSEKVLEPVHFLSLLDIKANWF
KRWMHGYYSRTVVLKLLERKYKPVIVTALQQCIYYLESCDAVREGTLEITHAMEHQQIGS
AQRSCYSAKELEYAHFVHSLCVLGRLLMYTNGRKLFPIKVRKKRDPVTLSDLVVILISIM
YQHPNTHHSDLSHSDTLSPTTLVMEVLRTLCERTECAVECMYQIPVVETLLVPILALLKG
KQAKLNSPESSLTHIADTLARIATTERGLALFLYERKIVSAEGEGISAAHVIVQFTQALL
AKELRACEELQNSAAVKGAFIFVCRQMYHTCEGLQVLRPYSLHECIAQAWRKVSSLSERI
PTPVPGALAPSSSQDLQSIMAWEEMLLDNLLNFAATPKGLMLLQQTGATHECVAYMFTRF
TKKLQVSRCEKFGYGVMVTQFAATSPGIVALRSSGFIQAIVVELWSALECGREDVRVVHP
KSIPMEPIDRSCLKSFLTLVNLLSSPHAVLELLGHQMLPNKTEYSLREMPTSVIDVMDRL
VVINSDSKIHSLFNYEQSHTFGLRLLSAICCNLDSLLLLESQYKLSDVLLQSQKDNMVES
STGQDEFVIDGLSVERNHLLVRMNVIGGPSEKRLPSRALQKGNDPYPWPIFSSYPVPTCY
TLEIPKTSWTKQDSEVSAFLTSSKDGERDENWMENCRRHLCKAITNKSSTLTGSVLADLL
ERAVVHLSSSPPHCFFPPAEYKVVDHDIKARNLTPVEQMGCCMALRYGLLLKLVREDSEQ
DLCLLIKHCQEFLSQQRITIQSDLCYLQGGYPGHDWLSSTIFLLMGGDVGRSLSLLLRFS
RLLTSAFLWPPRSYRSVHMPTDMAQSGVPPLYSCTAHYVEMLLKAEVPLVFSAFRMSGFT
PSQMCMQWLTQCFWNYLDWPEICHYVTTCIIMGVDYQVYMCVAVLKHLQQEILQHTQTQD
LQLFLKEDPIEGFRVGDYLEYMESLERRYRSMVLIDMRNSLLKST
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtttttttcctcggaggacgaggccgagctccagtccctgctcagacagctt
ctgaagagcgtgcgagaacgaatcaccaacgcgccatcggtggaatgcgccgaggagatc
ctgcttcacctggaggagaccgacaagaacttccacaattatgagttcgttaagtatctg
cgtcagtacgtggagagcagcctgggggccgttatcgaggaggaaacggagagctgttcc
aggggagacggccacggcgtcgggtccgggcaggacacgctggtccacgctgtgactaga
agaaccagagaatctgcacagtataagcagatgatgcagaccttaaagcagaccatgacg
gtgatcgtggagtcactgctgaacaaatttgaggaggatcagcttaagaaggaggagacg
agcggcacaaaccagcgtgaccagtcgagctgccactacacggacaactgctccgacagc
gactcctcttttaatcagagctatggcttcatcaaacaggagcagctccaggtcatttct
gagaagctcgatccaagcaggccaagagaggtacgctgggaagccttgcaattgctgtgc
tgcgctcctccttctgatgtgctgagctgtgagagctggacaggtctacgccgaaacctc
tcggctgctctcgctgacccagatcccgacctcagcgacaaagtgttgcgcttctttgcg
aaaacattttcgacctctcctctaaatgtgacgagggaaatctacaccagcctggtgaaa
agtctggagagcgacttcctgtatcacaagctgagtttcccctctgagtcagcgctcatg
gatgttaacaggcccgatatcactcggctccttaaacaaatacgcttaatgaatgacttc
cagaaagaagtgaccacattttggatccggcatcctgagaagtacatggaggaaattatc
gagagcacactcgctcttctctctctacatcccgaacacggcgtgtctgctcacggctcg
gagaaagttctagaaccggtccacttcctgtctctgttggatatcaaagccaattggttc
aagaggtggatgcatggctactacagcaggacagtggtcttgaagcttcttgagcgaaaa
tacaagccagtgattgttacagctcttcagcagtgcatttattacttggagtcctgtgat
gctgtcagagagggaaccttggagatcactcatgctatggagcatcaacagattggctct
gctcagagaagctgctacagcgctaaggagctggagtacgctcacttcgttcactcgctc
tgcgtgctcgggaggcttctgatgtacaccaacgggagaaagcttttccccattaaagtg
aggaagaaaagagatccggtgactctcagtgacttggtggtgatactgattagcatcatg
tatcagcacccaaacacacatcactccgatttgagtcactcagacactctctcccccacc
actctggtgatggaggtcctgaggaccctgtgcgaacgcactgaatgcgctgtggaatgt
atgtaccagatccccgttgtcgaaaccctgctggtccccatcctcgctctgctcaaaggg
aaacaggccaaattaaactctccagaaagcagcctgacccacatagcagacacgcttgcg
agaattgccaccacagaacgtggcttagcgcttttcctgtatgagaggaagattgtctct
gctgagggtgaaggtatttcggcagcacatgtgatcgtgcagttcactcaggcgctgcta
gctaaagagctgcgtgcgtgtgaagagctgcagaactcggccgctgtgaagggggccttc
attttcgtgtgccgtcagatgtaccacacgtgcgaggggctgcaggtgctcagaccctac
agcctgcatgaatgcatagcccaggcatggagaaaggtgagttcactttctgagcgaatt
ccaactcctgttcctggagctctcgcaccatcgtcctcccaggaccttcaaagcataatg
gcttgggaggagatgcttttggacaacctgctgaactttgccgccactcctaaaggcctg
atgcttcttcaacaaaccggagccactcatgagtgtgttgcctacatgttcaccaggttc
accaaaaagctccaggtgagcaggtgtgagaagtttggctatggggtgatggtgacccag
tttgcagctacatccccaggcattgttgctctgcggagctctggttttatccaggccata
gtggtggagttgtggtcagcactcgagtgtggcagagaggacgtgagagtcgtccatccc
aaatccatcccaatggagcccattgacaggagttgcctcaaatcctttctaacactggtg
aacctgctgtcctccccacatgctgtgttggagctgctgggacaccagatgctgcccaac
aagacagagtacagcctgagagaaatgcccacctccgttattgacgtgatggaccgcctc
gtcgttattaactcggattccaaaatccactccctgttcaactacgagcagtcacacaca
tttggccttagactcctaagtgcaatatgctgtaacctggactctcttctgctcctggag
tctcagtataaactctcagacgttctgcttcagagtcagaaggacaacatggtcgagtcc
tcaactggtcaagatgagtttgtcatcgatggcctgtctgtggagagaaaccacctcttg
gttcggatgaatgtgatcggtggcccatctgaaaagagacttccttccagagcactgcag
aaggggaatgatccctacccatggccgatattctcatcctaccctgtgcccacatgttac
accctcgaaatcccgaagacctcctggactaaacaagactcggaggtcagcgctttcctg
acgtcctctaaagatggcgagagagatgaaaactggatggagaactgcaggagacacttg
tgcaaagccattaccaacaaatccagcactcttacaggaagtgtgctagccgatcttctg
gagagagcagtggtgcatctctcctcctccccacctcactgcttcttcccacctgcagaa
tataaagtcgtggatcacgatataaaggctcgcaatctgacgcctgtggaacagatgggc
tgctgcatggctctcaggtatggcttactgctgaagttagtgagagaggattcagagcag
gatctctgtcttctcatcaaacactgtcaggagtttctgtctcagcagcgcatcacaatc
cagtctgatctctgttatctgcagggcggttaccctggtcacgactggctctcctccacc
atttttcttctgatgggcggagacgtgggccgctctctcagcctgctgctgcgtttctca
cggctgctgacttcagccttcctctggccgcctcgaagctacagatccgtgcacatgcca
acagacatggctcagtcgggtgtcccccctctctactcctgcactgctcactacgtggag
atgctgctaaaagccgaagtgcctctggtcttctctgcattcaggatgtccggcttcact
ccctcacagatgtgtatgcagtggctgactcagtgtttctggaactacttggactggcct
gagatctgccactacgtgaccacgtgcatcatcatgggcgtcgactaccaggtgtacatg
tgcgtcgccgtgctgaagcacctacagcaggaaatcctgcagcacacccagacccaggac
ctgcagctcttcctcaaggaggatcccatcgagggcttcagagtgggtgattacctggag
tacatggagagcctagagcgcagatacaggtccatggtgctcatagacatgaggaacagc
ttgctaaagagcacatag
DBGET
integrated database retrieval system