Ictalurus punctatus (channel catfish): 108258183
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Entry
108258183 CDS
T04658
Name
(RefSeq) P-selectin isoform X1
KO
K06496
selectin, platelet
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108258183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108258183
04090 CD molecules [BR:
ipu04090
]
108258183
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108258183
04091 Lectins [BR:
ipu04091
]
108258183
Cell adhesion molecules [BR:
ipu04515
]
Lectins
Selectins and C-type lectins
108258183
CD molecules [BR:
ipu04090
]
Proteins
108258183
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
108258183
Lectins [BR:
ipu04091
]
C-Type lectins
Selectins
108258183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
cEGF
EGF_3
EGF
hEGF
EGF_MSP1_1
EGF_Teneurin
EGF_2
DUF1635
Motif
Other DBs
NCBI-GeneID:
108258183
NCBI-ProteinID:
XP_017312141
Ensembl:
ENSIPUG00000023961
UniProt:
A0A2D0Q379
LinkDB
All DBs
Position
25:complement(135573..150019)
Genome browser
AA seq
1060 aa
AA seq
DB search
MFCWKHIRMHFGWIVLMTMVNNGVQAWTYHYNTDTSMEWEIARQWCRQHYTDMVAIQNKQ
EVIYLNQMLPLHRSYYWIGLRKMAGQWTWVGTMKPLAPEAASWATGEPNNQGTSEDCVEI
YIKRSKDPGMWNDDNCSKKKAALCYTASCFERSCSEHAECVENIGNYTCECNPGFTGPRC
NEAVECGAVKTPEQGFVQCSHVYGDFRFNSSCQFHCARGYILQGSKHLHCLSLGKWDHDP
PECQVVECPPITTSNSGWNMTCNHPRHTNSYNSTCVFRCDEGFELRGSHTTRCDHTGQWT
HNTPTCTAVTCEPLVMPEKGHMTCTDPLGKFSFRSSCAVTCEEGYMLRGENTLTCIKTGN
WSAETPTCEVVRCSALNSAPHGSTHCTDPLEKFAYSSICRFECDIGFLLMGSNYTYCNAQ
GNWTHCLPVCQVVQCSPLSAHSSDVRMNCTHPLSTNSYNSTCVFNCDEGFKLIGSYKTQC
DHTGQWTAKSPTCKAVTCEPLVRPEKGHMTCTEPLGKFSFRSSCAVTCEEGYTLRGESTL
TCIKTGNWSAETPTCEAVTCEPLVRPEKGHMTCTDPLGKFSFRSSCAVTCEEGYTLRGEN
TLTCVKTGNWSAETPTCEVVRCSALNSAPHGSMHCTDPLEKFAYSSICRFECDIGFLLMG
SNYTYCNAQGNWTHSLPVCQVVQCSPLSAHSSDVRMNCTHPLSTNSYNSTCVFNCDEGFK
LIGSYKTQCDHTGQWTAKSPTCKAVTCEPLVMPEKGHMTCTDPLGKFSFRSSCAVTCEEG
YTLRGENTLTCIKTGNWSAETPTCEVVRCSALNSAPHGSMHCTDPLEKFAYSSICRFECD
IGFLLMGSNYTYCNVQGNWTHSLPVCQARQCPLLASPEKGWMNCSHPHFLFSYGSHCGFG
CDIGYVLREESKLDCTTAGTWSQEIPSCKVVQCESLLRAPLLQSDSVSVPFMNCSHPRGD
FSFGSRCAFSCPEGYRLNGTTDLMCTSGGFWTGLLPTCITEDMPLGPAFLIYGAIGAASS
LGLLLMGGLVMLLVRKFSKDTFTPDYSAWDGALNPVFEEN
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttggaagcatataaggatgcattttggatggatagtgcttatgactatggtg
aataatggagtccaggcctggacataccattacaacacagacaccagcatggagtgggaa
atagcacgccagtggtgcaggcagcattacaccgacatggtagccatccagaacaagcaa
gaggtcatctacctgaaccagatgttgcccttgcatcgctcctactactggattggcctt
aggaaaatggctggccagtggacatgggtgggtaccatgaagcccctggcacccgaggca
gccagctgggcaacaggagaacccaataaccagggaactagtgaagactgcgtggagatc
tacatcaagaggtccaaggacccaggcatgtggaatgatgacaattgcagcaaaaagaaa
gcagcactctgttacacagcatcgtgttttgagaggtcgtgcagtgagcatgccgagtgt
gtggagaacattggaaactacacgtgcgagtgtaatccagggttcacaggaccacgctgt
aatgaagctgtagagtgtggcgcggtcaaaactccagagcagggttttgtgcagtgtagc
catgtttatggagacttccgtttcaattcatcctgccagttccactgtgcccgtggctac
atattacagggttcaaaacatctacactgcttatcactggggaagtgggatcatgatcct
cccgagtgccaggttgtcgaatgtcctccaattacaacttcaaacagtggatggaatatg
acatgcaaccatcctcggcacacaaacagctacaactctacatgtgtgttcagatgtgac
gagggttttgagctgagaggttcacacacaacccggtgcgatcacactggacagtggaca
cacaacaccccaacctgcacagctgtgacctgtgagccacttgtgatgccggagaagggt
cacatgacctgtactgatccactgggaaagttctccttccgttcatcttgtgctgtgacc
tgtgaggaaggatacatgctgagaggagagaacacactcacctgcatcaagaccggcaac
tggtcagcagaaactccaacatgtgaagttgtaaggtgcagcgctctcaattctgctcct
catggctccacgcattgtacggacccgttggagaaattcgcttatagctccatttgtcgg
ttcgagtgtgacatcgggtttctgctgatgggttcaaactacacctactgtaacgcacag
ggaaattggacccactgccttccagtgtgtcaagtggtacagtgttctcctctgtctgct
cactccagtgatgtgagaatgaactgcactcatcccctctccaccaacagctacaactcc
acatgtgtgtttaactgcgatgagggctttaagctcataggttcctataaaactcagtgt
gatcacactggacagtggacagccaagtcccccacttgcaaagctgtgacctgtgagcca
cttgtgaggcctgagaagggtcacatgacctgtactgagccactggggaagttctccttc
cgttcatcttgcgctgtgacctgtgaggaaggatacacgctgagaggagagagcacactc
acctgcatcaagaccggcaactggtcagcagaaactccaacatgtgaagctgtgacctgt
gagccacttgtgaggcctgagaagggtcacatgacctgtactgatccactgggaaagttc
tccttccgttcatcttgcgctgtgacctgtgaggaaggatacacgctgagaggagagaac
acactcacctgcgtcaagaccggcaactggtcagcagaaactccaacatgtgaagttgta
aggtgcagcgctctcaattctgctcctcatggctccatgcattgtacggacccgttggaa
aaattcgcttatagctccatttgtcggttcgagtgtgacatcgggtttctgctgatgggt
tcaaactacacctactgtaacgcacagggaaattggacccacagccttccagtgtgtcaa
gtggtacagtgttctcctctgtctgctcactccagtgatgtgagaatgaactgtactcat
cccctctccaccaacagctacaactccacatgtgtgtttaactgcgatgagggctttaag
ctcataggttcctataaaactcagtgtgatcacactggacagtggacagccaagtccccc
acttgcaaagctgtgacctgtgagccacttgtgatgccggagaagggtcacatgacctgt
actgatccactgggaaagttctccttccgttcatcttgtgctgtgacctgtgaggaagga
tacacgctgagaggagagaacacactcacctgcatcaagaccggcaactggtcagcagaa
actccaacatgtgaagttgtaaggtgcagcgctctcaattctgctcctcatggctccatg
cattgtacggacccgttggagaaattcgcttatagctccatttgtcggttcgagtgtgac
atcgggtttctgctgatgggttcaaactacacctactgtaatgtacagggaaattggacc
cacagccttccagtgtgtcaagctcgacagtgccctttgctggccagtccagaaaaaggc
tggatgaattgctctcaccctcacttcctcttcagttatggctcacattgtggttttgga
tgcgacattggctatgtgctcagagaggaatctaagttggactgcacgacagcaggaacc
tggagtcaggagataccttcttgtaaagtggttcagtgtgaatccctcttgcgggcacct
cttttgcaatcggattctgtttctgtcccctttatgaactgctcccatcccagaggcgac
ttcagcttcggctcccggtgtgcgttcagctgtccggaaggctacaggctgaacggaact
actgacctgatgtgtacgtctggtggattttggactggtctgctgcctacctgcatcacg
gaggacatgccattaggtcctgcttttcttatatatggtgcaataggcgcagcatcatca
cttggcctgctgctgatggggggattggtcatgctgttggtgcggaagttcagcaaggat
acgttcactccggattactcagcctgggatggagctctaaatccagtatttgaagaaaat
taa
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