Ictalurus punctatus (channel catfish): 108258200
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Entry
108258200 CDS
T04658
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108258200
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108258200
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
AAA_11
TERB2
Motif
Other DBs
NCBI-GeneID:
108258200
NCBI-ProteinID:
XP_017312215
Ensembl:
ENSIPUG00000011759
UniProt:
A0A2D0Q4C8
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Position
1:complement(18946280..18962655)
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AA seq
746 aa
AA seq
DB search
MFSTIKKLIRGPVLVPSPATTPAPTPAPASAPAPASPPAPAPASPTQPVKDEKPAVKENE
AKKEEETPAPAPTPAPAAAPKPEEKLSKPEKEQPPAEEQEAQPPPPCQIVINKYSDAHLL
KIVHQMQQRTQIYKEKVIDPYASSPECSPPVTPVLRKKDFLKKQEEERKRKEEDERIKKE
EEVKKAAAKAEEKKEKKEEKKEEKKDDKTKDEKKEETEPAKKRFLTISSKVKCTCLDSML
KPIEDRMDKLLGTSIDPCTDRRYITWLSVVTIAFSYNLWFIPVRMVFSCHTPGSIPLWFT
ADVLADLIYIIDMIIFQPRLQFCKSGDIIYDRAVIKKNYRASLKFQHALISVIPLDIFYI
PFGFQSIFRINRIVRFEAFFEFSDRLEGIMTKAYIWRVIRTIGYLLFVLHINACLYYVAS
AYQGIGTTKWVYSGRGNAYLHCYYFAVRTLINIGGLPEPYTVFEITFQLTNFFIGVFVFS
SLIGQMRDVIGAATAGQTYFRASMDACVAYMVSNHIPKLVQHRVRTWYNYTWDSQGMLDE
SELLEQMPLVMRTAIAVDINLTTFQKIDLFKGCDNQMLVDMLLRLKSIVYLPGDFVCKKG
DIGKEMYIIKAGEVQVVGGPDNKIIFVTLKAGCVFGEISLLQSSANGGNRRTANVAAHGF
ANLFVLDKKDLNDILVHYPESQKVLARKGRKLMKAKGPAAAKAEGEKKKGIELFGPKPPT
PKMLRAFGRFNKKAFIDKLKVSTNMQ
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcacaatcaagaagctgatcaggggccctgtgctagttccttcaccagccaca
acacctgctcctacacctgctcctgcatcagctcctgcaccagcttcaccaccagctcct
gcaccagcttcaccaactcaaccagttaaggatgaaaagcctgcagtcaaagaaaatgaa
gccaagaaagaagaagaaactcctgctccagccccaacacctgcaccagctgctgcgcca
aaaccagaagagaaactttccaagcctgaaaaagaacagccaccagctgaagagcaagaa
gcacagcctcctccaccatgtcaaattgtaataaacaagtactctgatgcacatcttcta
aaaatagtccaccagatgcagcaacgtacacaaatttacaaagaaaaagtcatagacccc
tatgcatcctcacctgagtgcagccctccagtcacacctgttttgagaaaaaaggatttc
ttgaaaaagcaagaagaagagagaaaaagaaaagaagaggatgagaggatcaaaaaggag
gaggaggtaaagaaagcagcagcaaaagccgaggaaaagaaagagaagaaagaagagaag
aaggaagaaaagaaagatgataaaacaaaagatgagaagaaagaagagactgaaccagcc
aagaaaagatttcttactatttcttcgaaagtcaaatgcacctgtctagactcaatgctg
aaacctattgaagacagaatggataaacttttgggcacatccatagatccatgcacagat
cggcggtacatcacttggcttagcgtggtgactattgccttcagctacaacctttggttc
ataccagtccgtatggtcttctcctgtcacactcctggctcaattcctctgtggtttact
gcagatgtcctagctgacctgatctacatcatcgatatgatcattttccagccaaggctc
cagttctgcaagagtggagatattatttatgaccgagctgttattaagaagaattacaga
gcctccctaaaatttcagcatgccctaatatcagtcatacccctggacatcttctatatt
ccatttggattccaatccattttcagaattaatcgcatcgtgaggtttgaggcttttttt
gagttcagtgatcgacttgagggcatcatgacaaaggcgtacatctggagagtaattcgc
accattggatatctcctgtttgtccttcatatcaatgcttgcctttactatgtggcatct
gcctaccaaggcattggtacaaccaagtgggtctacagtggccgtggcaatgcgtacttg
cactgttactattttgctgtgcggaccctgatcaacattggtggactacctgagccttac
actgtttttgagatcacatttcagttgacaaacttttttattggtgtctttgtcttctca
agtttaattggacagatgagagatgtcattggggctgcaactgctggtcagacatacttc
cgtgcctccatggatgcatgtgtagcctatatggtgtcaaatcacattccaaagctggta
caacacagagtccgtacatggtacaactacacctgggactcacagggtatgctggatgag
tcagagttgctggaacaaatgccactggtaatgagaacggctatcgctgtggacatcaat
ctcaccactttccagaagattgacctgtttaagggatgtgataaccagatgcttgtggac
atgttgctgaggctgaagtctatagtctatctgccaggggattttgtgtgtaagaagggt
gacattggtaaggagatgtacatcatcaaagccggagaggtacaggttgttggtggacct
gacaacaagataatttttgtgacattgaaggcaggctgtgtgttcggtgagattagtctt
ctgcagtcttcagcaaatggaggcaacaggagaacagctaatgtggcagctcatggattt
gctaacctctttgtgctggataagaaagacctcaatgacatcctggttcactacccagaa
tctcagaaagttctggccaggaaaggaaggaaactaatgaaggccaagggtccagctgcg
gccaaagcagaaggggagaaaaagaaaggcatagagctgtttggacccaaacctcccact
cctaaaatgcttcgggcatttggaaggttcaacaaaaaagcatttatagacaaactcaag
gtctctacaaatatgcaataa
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