Ictalurus punctatus (channel catfish): 108258276
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Entry
108258276 CDS
T04658
Name
(RefSeq) integrator complex subunit 10
KO
K13147
integrator complex subunit 10
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108258276
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108258276
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INT10
PcF
Motif
Other DBs
NCBI-GeneID:
108258276
NCBI-ProteinID:
XP_017312275
Ensembl:
ENSIPUG00000000244
UniProt:
A0A2D0Q4I9
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Position
2:complement(15582050..15603224)
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AA seq
713 aa
AA seq
DB search
MSAQGDCDFLVKRARELVPEDPWAAKAWLITARTLYPADFNIQYEMYMIERNAERTSSAG
RLLYDIFINFPEQPVVWREISVITAALRNDSQDKHAQFLKGVFETLPGPVQCQMLLKATE
QCFNTLEKAEMHLLLLKRFPESVVQHGVSLGESLLEAENMQDLDTPVNCYRKLFVCDVLP
LIINNMEMRLPASLLHKYMHKAAEFYIGYVTRGPCADAQLPGPQEGGGLKSPGKGRGQRG
VIDGLSEKSSLVAEPWVRLLEIVGSMGLRCEWQGEKGTRTYSELLQRVKELCRYLPGLEG
ETFSRCCAQIVTCSTLVLFRSAHFYISTVQPSLFQGHNSLGSTPWVLVEDLSSVFNDIEP
ERPSGKHAHKKRKLADGREKTMSSDDEDALGKGRGRHILVNMTEMPAWAEMLEHFRTARE
SWDLLHSHETLESEYNKICAAWKTESWLWFRIFLTDMIMYQGHYRKALSSLMQLTSLQPQ
QNQNTHPSASSLETHRALIQQASCHYALGEYRLACEKLLEVVSGLVPQNQEATKSSEEQN
RGRNKGKKGNDLRLIPCTSKDILPFCLQLMLACFKLRAFTEGNRDDLSLGHVIVLLQHDW
PQGETLFLKAVDKICDQGSFQYENFFNYVTNIDMLEEFAYLRTTEGGRVQLELLPNQGML
IKHHTVTRGITKGVKEDFRLAMERQVSRCGENLLSVLHRFCINEKIILIQSLP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacagggggactgtgatttcttggtgaaacgtgcgcgcgagctcgtgcccgaa
gacccgtgggctgctaaagcctggctcatcaccgcacgcacgctctatccggctgacttc
aacatacagtatgagatgtacatgattgagcgcaatgcagagaggacctcttcggctggc
agactgctctacgacatatttattaatttcccggagcagccagtggtgtggcgtgagatc
agcgtaatcacagcagcattgaggaacgacagccaggacaagcacgcacagttcctcaaa
ggtgtgtttgagactctaccaggccctgtgcagtgtcagatgcttttgaaagccactgaa
cagtgttttaacactctggagaaagcagagatgcacctgctgctgctgaagagattccca
gagtctgtggtacagcacggggtgagtttaggagagtccctcttggaggcggagaacatg
caggacttggacacaccagtcaactgttacaggaaactgtttgtatgtgatgtcctgccg
ttgatcattaataatatggagatgcggcttcctgccagtctgttgcacaagtacatgcac
aaagcggctgagttttacatcggctatgtgacgcgaggcccctgcgcagatgcacagtta
ccgggacctcaggaagggggagggcttaagtctcccggaaaggggcgtggtcagcgtggt
gtgattgacggcttgtcagagaagtcgtcgttagtggcggagccgtgggtgaggctgctg
gagattgttgggtcgatggggctgaggtgcgagtggcagggagagaagggcaccaggaca
tactcggagctactgcagcgggtgaaggaattgtgccgctatttgcctggtttggagggc
gagactttctctcgctgctgtgcccaaattgtcacctgttctacgctagttctcttccgc
agcgcacacttctacatctccacagtgcagccctctctctttcagggtcataactcactg
ggctcgactccatgggttctggtggaggatctttcgagtgtgtttaacgacattgagccc
gagagaccaagcggaaaacatgcacataaaaaacgcaaacttgcagacgggcgtgagaaa
accatgagttctgatgatgaggacgctctaggtaagggacgaggaagacacattttggtg
aatatgactgaaatgccagcttgggccgagatgttagagcatttcagaacggcgagagag
agctgggacctcttacactcccatgagactctggaatcagagtacaacaagatctgcgca
gcatggaagactgaaagctggctttggttccggatatttctcaccgatatgatcatgtat
cagggtcactacaggaaagctctgtccagtctaatgcagctaacgtctcttcagccccag
cagaaccagaacacacacccatcagcctccagcctggagacacacagagccttaattcag
caagcatcctgtcactacgcacttggggagtaccggttggcctgtgagaagctgttggag
gttgtaagtggtctggtacctcaaaatcaggaggcaacaaagtccagcgaggagcagaac
cgaggaagaaacaaaggcaagaaaggcaatgacttgaggcttattccctgcactagcaaa
gacattctgcccttctgtctgcagctcatgctggcctgcttcaaattgcgagcgttcacc
gagggcaacagagatgacctgtctctaggtcatgtgatcgttctcctgcagcatgattgg
ccacagggagagactctgttcttgaaggcagtggacaaaatttgtgatcaggggagtttt
cagtacgagaacttcttcaactacgtcaccaacatcgatatgttggaagagttcgcgtac
ctccgtacgacagaaggcgggcgggtccagctggagctattgcccaatcaggggatgcta
attaagcatcacactgtgactcgtggcattaccaaaggtgtgaaagaagatttccggctg
gccatggaacgccaggtgtctcgctgcggagaaaatctactcagcgtgctacatcgattc
tgcattaatgagaaaatcatcctcatccagtccttaccatga
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