Ictalurus punctatus (channel catfish): 108258284
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Entry
108258284 CDS
T04658
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108258284 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108258284 (grin2ab)
04082 Neuroactive ligand signaling
108258284 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108258284 (grin2ab)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108258284 (grin2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
108258284
NCBI-ProteinID:
XP_017312305
Ensembl:
ENSIPUG00000001415
UniProt:
A0A2D0Q4M1
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Position
26:558933..637674
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AA seq
1453 aa
AA seq
DB search
MGVAVRLALMAWALLGWSQAAESAPSLSVAVILGETRGVPERALRPAPGIGAPLDISVLA
VQVNHTDPGSMLTHLCQLMARQRLHGLVYGDGTDQEAIAQMLDFVSSQTAMPILGVHGGA
AMTMAEKDDSSSFFQFSASLHQEALLMLAVMEEYDWHVFSVVTTRFPGHQEFVATIRVTV
EHSFVRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKDEAELVLAEARSLGLVG
AGFVWIVPSLTSGSPERTAETFPPGTISIAYDEWDYPLETRVRDAVGIFSHAAAAMFQEQ
GRIPDGTVSCSGQAEKPEVPPSALRRYMMGVNLEGRDLSFMDDGYQVNPKLVVIVLNNER
EWEKMGRWENHSLILKFPVWPRYNSFGDAEADENHLSIVTLEEKPFVIVDDVDILTGTCV
RNSVPCRKHIKDNSTGGSYVKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNM
WNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSFSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQSGVQDALVSLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYVFATTGYGIALQKGSYWKRHVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITFCWEHLFYWRLRYCFTGL
CSGRPGLLFTISRGIWSCIHGVHIEMKKLPVLDFSPQANMLHLLKSAKEITTLGVTSPKR
PIASILPPTPGLLELISGSKGNNLAPKEAIYNNTNTMLANRHKEPLNNTLLPGQCALSLA
DAQSGVAVSGGTGGGSGGDSGGLPASKSRALWKKSVETLRQTQGPSQNSPPSSAPVFEPH
ATMKSQRYLPEDLPARSDLSDSSGRMDLQKQHKVKETLRKRNRLPRDLSDVELSALPGQQ
SQQSNHSAQIYSQNSQSSQIYTIDSVDQEHGLHYPDIFNEHRDNKHRPSSSSEQQPILQL
NSNLFPQAHEPDVMQNATTAAKEKKYNTYGKPGGVGLSPAVTTPAQDHRHTHCRSCLSKF
SNYSGLYTMRPPQYRCEACLHSANLYDISEDQFLHPNAGAIRGGSVDRSFCAFLPQPNAS
FTAYLPQSDQEGEGLISHYQNEGIYIHRQHSYENLPQKNSSRRVSLQDSTPHTNLHTSTM
VPDKLPKSQSAQLNHTLASVGVSGLGIGRRSKSMYPARPTENPFLQTLRDDQRLAHGRSS
TDIYKQLVPLTLSPVVDGKGLGIGVATPDLFYPEHVMPYVALSPVGTFPAPRALSAGGAR
RVYKRMPSIESDV
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgcagtacgcctggcactgatggcctgggctttgctgggctggtctcaggca
gctgagagcgcaccctctctaagcgtggcggtgatcctgggagagactcgcggtgtccct
gaacgggcattgcgtccagcaccaggcatcggcgcaccactggacatcagcgtgctcgcc
gtgcaagtgaaccacacagaccccggcagcatgctcacccacctgtgccagctcatggca
cgccagcgattgcatggccttgtgtacggcgacggaactgaccaggaagctatcgcccag
atgctggactttgtctcttcccagactgccatgcccatcctgggcgtccacgggggtgca
gccatgaccatggctgagaaggacgacagctcgtcgtttttccagttcagcgcatcgctc
catcaggaggccctgctcatgctggctgtcatggaggagtacgactggcacgtgttctcc
gtggtgacgaccaggttccccggccaccaggagttcgtggcgaccatccgcgtgaccgtg
gagcacagtttcgtacgctgggacctgcagagcgtggtgacgctagacggcgtgggcgag
cccgaagaccgagcgcacgtgcagctcaagcgcatccagtcgcccgtcattctgctctac
tgctccaaggacgaggccgagctggtgctggccgaggcccggtcgctcgggttggtcggc
gccggcttcgtgtggatcgtcccgagtctcacgtccggcagccccgagcgtacagcggaa
acctttccgccggggaccatttccatagcgtacgacgagtgggactatccgctggagacg
cgcgtgagggacgcggtggggattttcagtcacgccgccgccgccatgtttcaagagcaa
ggacgcataccggacgggacggtcagctgctcgggtcaagcggagaagccagaggttcct
cccagcgcgttacgcaggtatatgatgggtgtaaatctggagggcagagatctgtcgttc
atggacgacggttatcaggtgaaccctaaactggtggttatcgtactcaacaacgagcgg
gaatgggagaagatgggccgctgggagaaccattcattgatactgaaatttccagtgtgg
ccacggtacaactcctttggtgatgcagaagcggacgaaaatcacctgagcatcgtgaca
ttagaggagaagccgtttgttattgtggacgacgtggacattctgacggggacctgcgtc
cgtaactctgtcccctgcaggaaacacatcaaagataacagtacaggtggatcgtatgta
aagcagtgctgtaagggcttttgtatcgatatcctaaagaagatcgccaggaacgtaaag
ttcacgtatgacctttacctggtgactaacggcaaacacggcaagaaaatcaacaacatg
tggaacggcatggtgggcgaggtggtttataagaaggccgtgatggccgtcggttcattg
accataaacgaggagaggtcagaggtcatcgacttctctgtgccgttcgtggagacgggg
atcagcgtcatggtttcccgcagcaacggaaccgtatcgccctcggcctttctggagccg
ttcagcgcatcggtgtgggtgatgatgttcgtcatgttactcatcgtcacggcaatcgcc
gtcttcctgttcgagttcatcagtccactgggcttcaacagaaacctcgcacagggcaaa
gacccccacggtccatctttcacaatcggcaaggccgtctggcttctgtggggtctcgta
ttcaataactctgtaccagtacagaaccccagaggcacgaccagtaagttcatagtgtcc
gtgtgggccttctttgccgtgatcttcctggccagttacactgcgaacctggctgccttc
atgatccaggaggagttcgtggaccaggtcactgggctcagtgacagaaaattccagagc
ccgtattccttctcgccgccatttcgttttggtacagtcccaaatggcagcactgagagg
aacatcaggaagaactacccagatatgcaccagtacatggtcaaataccaccaatccggc
gtccaggacgcattggtcagccttaagacgggcaagctggatgcattcatctacgacgcg
gctgtgttgaactacatggcagggcgagacgacggatgtaagctggtgaccatcggcagc
ggctacgtcttcgccaccaccggttacggcatcgccctccagaaaggatcctactggaag
cggcatgtggaccttgccattctagggatcatcggagatggtgagatggaggagctggag
gctcagtggctcacgggtatctgccataatgagaaaaatgaagtgatgagcagtcagctg
gatgtggacaacatggctggtgtgttctacatgctggcagctgccatggcgctctctctg
atcaccttctgctgggaacacctgttctactggcgactgcggtactgcttcactggacta
tgctcggggcgacctggacttctttttacaataagcaggggtatctggagttgtattcat
ggtgttcacattgagatgaagaagcttcctgtgttggatttcagtcctcaggccaacatg
ttgcacctgctgaaatcggccaaagagattacgactctaggggtaacctcacctaaacgg
cccatcgctagcatcctcccccctacacccggactgctagaacttattagtggtagcaaa
ggcaataaccttgctccaaaagaggcgatctataacaataccaacaccatgcttgcaaac
cgccacaaagagcctctaaacaacacccttttgcctggtcagtgtgcccttagccttgct
gatgcccagtctggtgtggcagtcagcggaggcacaggaggaggtagtggtggtgactcg
ggaggactgcctgcctccaaatcccgtgctctctggaaaaagtcagtcgaaactctgcga
cagacccaaggaccatcccaaaattccccaccttcctccgcaccagtctttgagccacat
gcaactatgaaaagccagaggtatttgcctgaagacctgcctgcacgctcagacttgtct
gacagttctggccgcatggaccttcaaaagcagcacaaggtcaaagagacgctccggaag
cgtaaccgtctgccacgggacctaagcgacgtggaactctctgcattgcctggccagcag
agccagcagagcaatcacagtgctcagatatattcccagaatagtcagagcagccagatc
tacaccattgactctgtagaccaggagcacggactacactacccggacatattcaacgag
cacagagacaacaagcaccgcccttcgtcttcttcagagcaacagccaatactgcagctt
aacagcaatctgttccctcaggctcacgagccggacgtcatgcagaacgccacgactgct
gccaaggagaaaaagtacaatacttacggaaagcctggtggggtaggactcagtccagca
gtgaccactcctgcccaggaccacagacacacccactgccgtagctgtctttcaaagttc
tccaactattctgggctttataccatgcgacctcctcagtatcgctgtgaggcctgtctg
cactctgccaacctgtatgacataagtgaggatcagttcctgcaccctaacgcaggtgcc
attcgaggcgggagtgtagacaggagcttctgcgcatttctgccacaacccaatgcttcc
ttcacggcctaccttccccagagtgaccaagaaggtgaagggctcattagtcactatcaa
aatgagggcatttacatccatcgccagcactcttatgagaacctgcctcaaaagaattct
tcacgacgcgttagccttcaggacagcactcctcacactaacctgcacacgtccaccatg
gtcccggataagcttccaaagagccagtcggcgcagctcaaccacacgcttgcttcagta
ggcgttagcgggctcggcatcggtcggcgcagcaaatcgatgtacccagcccgtccgacc
gagaaccctttcctgcagacgctccgcgacgaccagcgcctggctcacggccgcagctcc
acggacatttacaaacagctggtgccacttacattaagtccggttgtcgacggcaagggg
ctcggcataggggtggcaacacctgacctcttttaccccgagcatgtaatgccttatgta
gccctttccccagtcggcacattcccagccccgagagcgttgagtgccggtggtgcacga
cgcgtctacaagaggatgcccagcattgaatccgacgtctga
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