Ictalurus punctatus (channel catfish): 108258290
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Entry
108258290 CDS
T04658
Symbol
zgc:158403
Name
(RefSeq) tetratricopeptide repeat protein 39A
KO
K24943
tetratricopeptide repeat protein 39
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108258290 (zgc:158403)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
108258290 (zgc:158403)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
TPR_12
TPR_1
TPR_14
TPR_16
TPR_6
TPR_8
TPR_7
RAG1
TPR_2
ARM_TT21
TPR_10
DUF4810
T7SS_EccA1_N
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
108258290
NCBI-ProteinID:
XP_017312317
Ensembl:
ENSIPUG00000006835
UniProt:
A0A2D0Q202
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Position
2:26203672..26231422
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AA seq
565 aa
AA seq
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MSSGKDAPVSANSTQTSLKACLEECMEALDLFLNNHFSESLDKLQPRCKESMYHALIYAT
VLEMQAMMTFQHDDIVNAGNTMKSAQEVCQRFRKRSGSLAARAAGDVLSEEELHAEACYA
ECLLQRAALTFLQDENMVSFIKGGIKVRNSYLIYKELHSFIESHSSFKGPNHKHLEGGVA
FGIGAFNLTLSLFPARILKVLEFAGFSGDKEYGLSKLYEGATSHNLRSMLCALLLLCYYT
FLSFILGTGEGDVADAEKLLKPFRLRYPHGAIFLFFAGRVEEIKGNIDEAVLLFEDGCKA
QQAWKQFHHMCYWELMWCFTYKRHWKMAYFYADLLSQESRWSKAMYVYMKAACLSMLPEG
AARPFGENEIELFRQVPSFKQKIAGKSPPTEKFAIRKARRYRASTPIPLRVPVLEMMYMW
NGFSMISKQPELTAGILETLLEAEQTLQAAPENDYTVDDSCLILLLKGLCLKNQNRLHAA
EDCFNKVYSSEKKLKYDHYLIPNTLLELGLLYTDTGRRDQAIRLLQKAKNNYKEYSMESR
TQFRIHAALSKLKADMSDQDEITAL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgggaaagatgcacctgttagcgcaaactccacacagacgtccttaaaggca
tgtcttgaagagtgtatggaggccttggatctgttcctcaacaaccacttcagcgagagt
ctagacaaactgcagccaagatgtaaagagagtatgtatcatgctctgatctacgctaca
gtattagagatgcaagctatgatgaccttccaacatgatgacattgtcaacgcaggaaac
acaatgaagagtgctcaagaagtttgccagaggtttcgtaagaggtctggcagtctggca
gccagagcagcaggagatgtgctgtctgaagaggagctccatgctgaggcgtgttatgcc
gaatgcttgctgcaaagagctgctctcacatttttacaggatgagaacatggtgagtttc
attaaaggaggaatcaaagtacgcaatagctacctcatatacaaggagctccactccttt
attgagtcacatagctccttcaaagggccaaatcacaagcacctggagggaggggtggca
tttggaatcggtgcgttcaacttgacactttccttgttccctgcgcggattctcaaggtt
ttggagtttgctggattttctggggataaggaatatgggctttccaagctgtatgaaggg
gccacctcccataacctgcgttcaatgctgtgtgccctgctgctgctctgctactacacc
ttcctctcatttattttagggacaggcgagggagatgtggctgatgctgagaagctgcta
aagccatttcggctacgatatccacatggggcgatttttcttttctttgcgggcagagtg
gaggaaataaaaggcaacattgatgaggcagtattgctgtttgaggatggttgcaaagca
cagcaggcctggaagcagtttcaccacatgtgctactgggaactgatgtggtgcttcact
tacaagaggcactggaagatggcctacttttacgccgacctgctcagccaggaaagccgc
tggtccaaggctatgtatgtgtacatgaaggctgcttgtctcagtatgctgccagaaggg
gcagctcggccatttggcgagaacgagattgagctcttcaggcaggtcccatccttcaaa
cagaagatagcagggaagtctcctcctacagaaaagtttgcaatccgcaaagcccgacgc
tacagagccagcacccccataccgctccgagttcctgtgcttgagatgatgtacatgtgg
aatggcttctccatgataagcaagcagccggaactcacagcgggcatactggaaactctg
ctggaggcagagcaaaccctgcaggctgctcccgagaatgactacactgtggatgacagc
tgcctgattttgttgctgaagggactgtgtctgaagaaccaaaaccgactgcacgctgct
gaagattgttttaacaaagtttacagcagtgagaagaagctgaagtatgaccactacctg
attcctaacaccctgctggagctgggcctgctctacactgatacaggaaggagggatcaa
gccatcagactcctgcagaaagccaaaaataactacaaagaatactcaatggagtcccgc
actcagttcaggatccacgcggctctgtctaaactgaaggccgacatgagtgaccaggac
gagatcacagccctgtaa
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