Ictalurus punctatus (channel catfish): 108258291
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Entry
108258291 CDS
T04658
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108258291 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108258291 (gpc6a)
Proteoglycans [BR:
ipu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
108258291 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Others
108258291 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
108258291
NCBI-ProteinID:
XP_017312315
Ensembl:
ENSIPUG00000005200
UniProt:
A0A2D0Q4N2
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Position
26:3900016..4073735
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AA seq
583 aa
AA seq
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MVRLQVCVLALSAALCLCSGGRGAERERVEDEEDGDDGVSRSCRDVKQALVERGFTAIRI
NQHQTTGEHLRVCSQEYTCCGVEMEDALAHRGKADLERLMEESSSALRTVFTTKHRKFDE
FFLELLDNSEKSLNHMFIRTYGNLFMQNSEIFEDLFSELRRYYTGGNVNLEEMLGDFWAR
LLEKMFQLLNSQFSFTDEYLECVSKYTDQLKPFGDTPRKLKVQITRALAAARTFVQGLMV
GREVANRVAKVNVFPGCSKALTRMLYCPYCGGFVDLKPCRSYCQNVMKGCLANQADLDPE
WNVFIDSMLLVAERLKGPFNIEAVMEPIDLKISEAIMTMQENSIQVSGKVFQGCGHPKPV
RSGSGRSTREVFNARFKPYSHEDMPPSESSGLDRLRSVWRTMQDSVIDIKEKLKQAKRFW
TSLPDVICSKDNVIEPSSEQCWNSHTKGRYFPEVVKDGLTNQLSNPEVDIDITRPDTFIR
QQIMALRVMTNKLRSAYNGNDISFQDSSDEVSGSGSGSGYTTEFEFTVTEAPAVGAGRQD
QATPLRPASDKATPLKPPSDSAAPLLVSPITLMAVTLLQFWWR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctgcaggtgtgtgtgctggctctgtccgcggcgctctgcctctgctcggga
ggacgaggagccgagcgcgagcgagtggaggatgaggaggatggtgatgatggagtctcg
cggagctgcagggatgtcaagcaggcgctcgtggagagaggattcactgccatcaggatt
aaccagcaccagaccacaggtgagcacctgcgtgtatgttctcaggagtacacatgctgt
ggggtggagatggaggacgcccttgcacatcgcggtaaagccgatctcgaacgcctgatg
gaggagagcagcagtgccctgagaactgtattcaccaccaaacacaggaagttcgacgag
ttcttcctggagttgctggacaactcggagaagtctctgaaccacatgttcatccgcacc
tacggcaacctgttcatgcaaaactcggagatcttcgaggacctgttctcggagctacgg
cgctactacacaggagggaacgtgaacctggaggagatgctgggcgacttctgggccagg
cttctggagaagatgttccagctgctgaactctcagttctctttcacagacgagtattta
gagtgtgtgagcaagtacacggaccagctgaagccgttcggggacacaccacgcaaactc
aaggtccagatcacacgtgccctcgctgctgcacgcaccttcgtacagggactcatggtg
ggacgggaggtggccaatcgtgtggccaaggtgaatgtgtttcccggctgcagtaaggcg
ttgactcggatgctgtattgtccgtactgcggcgggtttgtggacctcaagccgtgcagg
agttactgtcagaacgtcatgaagggctgcctcgctaatcaggctgacctggacccagag
tggaacgtcttcatcgattccatgctcctggtagctgagaggttgaaggggccgtttaac
atcgaggccgtgatggagccgatcgacttgaagatctctgaagccatcatgaccatgcag
gaaaacagcatacaagtctccggcaaggtgtttcagggttgtggtcatcccaaaccagtt
agatccggatcaggtcggagcacccgcgaggtgtttaatgctcggttcaaaccctacagc
cacgaagacatgcctccatcggagagttctggtctcgacagactgaggagcgtctggaga
acaatgcaggacagcgtgattgacattaaagagaagctgaagcaggcgaagaggttctgg
acatcactgcctgatgtgatatgttctaaagacaatgtgatagaaccgagcagtgagcag
tgctggaacagtcacactaaaggaaggtatttcccagaggttgtgaaagatggcctgacc
aatcagctgagtaatccagaggtggatattgacatcacccgcccagacaccttcatccgg
cagcagatcatggctctgagagtgatgaccaacaaactgcgcagcgcctacaacggcaac
gacatctccttccaggattccagtgatgaggtcagtggttctggcagcggaagcggctac
accactgagttcgagttcaccgtcacagaggcgccagcagtgggggcggggcgtcaagac
caggccacgcctctacgacctgcatctgataaagccacgcctcttaaacctccttctgac
tcggcggcgccccttctcgtctcaccaatcactttaatggcggtcacgttgcttcagttc
tggtggagataa
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