KEGG   Ictalurus punctatus (channel catfish): 108258291
Entry
108258291         CDS       T04658                                 
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
  KO
K08112  glypican 6
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ipu00535]
    108258291 (gpc6a)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ipu00537]
    108258291 (gpc6a)
Proteoglycans [BR:ipu00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   108258291 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ipu00537]
 Others
  108258291 (gpc6a)
SSDB
Motif
Pfam: Glypican Fz
Other DBs
NCBI-GeneID: 108258291
NCBI-ProteinID: XP_017312315
Ensembl: ENSIPUG00000005200
UniProt: A0A2D0Q4N2
LinkDB
Position
26:3900016..4073735
AA seq 583 aa
MVRLQVCVLALSAALCLCSGGRGAERERVEDEEDGDDGVSRSCRDVKQALVERGFTAIRI
NQHQTTGEHLRVCSQEYTCCGVEMEDALAHRGKADLERLMEESSSALRTVFTTKHRKFDE
FFLELLDNSEKSLNHMFIRTYGNLFMQNSEIFEDLFSELRRYYTGGNVNLEEMLGDFWAR
LLEKMFQLLNSQFSFTDEYLECVSKYTDQLKPFGDTPRKLKVQITRALAAARTFVQGLMV
GREVANRVAKVNVFPGCSKALTRMLYCPYCGGFVDLKPCRSYCQNVMKGCLANQADLDPE
WNVFIDSMLLVAERLKGPFNIEAVMEPIDLKISEAIMTMQENSIQVSGKVFQGCGHPKPV
RSGSGRSTREVFNARFKPYSHEDMPPSESSGLDRLRSVWRTMQDSVIDIKEKLKQAKRFW
TSLPDVICSKDNVIEPSSEQCWNSHTKGRYFPEVVKDGLTNQLSNPEVDIDITRPDTFIR
QQIMALRVMTNKLRSAYNGNDISFQDSSDEVSGSGSGSGYTTEFEFTVTEAPAVGAGRQD
QATPLRPASDKATPLKPPSDSAAPLLVSPITLMAVTLLQFWWR
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggtgaggctgcaggtgtgtgtgctggctctgtccgcggcgctctgcctctgctcggga
ggacgaggagccgagcgcgagcgagtggaggatgaggaggatggtgatgatggagtctcg
cggagctgcagggatgtcaagcaggcgctcgtggagagaggattcactgccatcaggatt
aaccagcaccagaccacaggtgagcacctgcgtgtatgttctcaggagtacacatgctgt
ggggtggagatggaggacgcccttgcacatcgcggtaaagccgatctcgaacgcctgatg
gaggagagcagcagtgccctgagaactgtattcaccaccaaacacaggaagttcgacgag
ttcttcctggagttgctggacaactcggagaagtctctgaaccacatgttcatccgcacc
tacggcaacctgttcatgcaaaactcggagatcttcgaggacctgttctcggagctacgg
cgctactacacaggagggaacgtgaacctggaggagatgctgggcgacttctgggccagg
cttctggagaagatgttccagctgctgaactctcagttctctttcacagacgagtattta
gagtgtgtgagcaagtacacggaccagctgaagccgttcggggacacaccacgcaaactc
aaggtccagatcacacgtgccctcgctgctgcacgcaccttcgtacagggactcatggtg
ggacgggaggtggccaatcgtgtggccaaggtgaatgtgtttcccggctgcagtaaggcg
ttgactcggatgctgtattgtccgtactgcggcgggtttgtggacctcaagccgtgcagg
agttactgtcagaacgtcatgaagggctgcctcgctaatcaggctgacctggacccagag
tggaacgtcttcatcgattccatgctcctggtagctgagaggttgaaggggccgtttaac
atcgaggccgtgatggagccgatcgacttgaagatctctgaagccatcatgaccatgcag
gaaaacagcatacaagtctccggcaaggtgtttcagggttgtggtcatcccaaaccagtt
agatccggatcaggtcggagcacccgcgaggtgtttaatgctcggttcaaaccctacagc
cacgaagacatgcctccatcggagagttctggtctcgacagactgaggagcgtctggaga
acaatgcaggacagcgtgattgacattaaagagaagctgaagcaggcgaagaggttctgg
acatcactgcctgatgtgatatgttctaaagacaatgtgatagaaccgagcagtgagcag
tgctggaacagtcacactaaaggaaggtatttcccagaggttgtgaaagatggcctgacc
aatcagctgagtaatccagaggtggatattgacatcacccgcccagacaccttcatccgg
cagcagatcatggctctgagagtgatgaccaacaaactgcgcagcgcctacaacggcaac
gacatctccttccaggattccagtgatgaggtcagtggttctggcagcggaagcggctac
accactgagttcgagttcaccgtcacagaggcgccagcagtgggggcggggcgtcaagac
caggccacgcctctacgacctgcatctgataaagccacgcctcttaaacctccttctgac
tcggcggcgccccttctcgtctcaccaatcactttaatggcggtcacgttgcttcagttc
tggtggagataa

DBGET integrated database retrieval system