Ictalurus punctatus (channel catfish): 108258318
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Entry
108258318 CDS
T04658
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108258318 (pcdh8)
Cell adhesion molecules [BR:
ipu04515
]
Cadherins
Protocadherins
108258318 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108258318
NCBI-ProteinID:
XP_017312359
Ensembl:
ENSIPUG00000012901
UniProt:
A0A2D0Q229
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All DBs
Position
26:9208651..9212749
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AA seq
975 aa
AA seq
DB search
MEIKKSLLSFSLIVIFAAWTVRGTTTKYYTYEEDAPGTFIGNLSTDLKIDVSEDPHTSFR
FMQEGNASLIRMRKSDGLLTVGERIDRESLCGSSSQCVITADVVVFSMEKFHLIHVEIHV
RDINDHAPVFPRRETRLEISENAAVDARFPIEVATDLDVGSNYIQSYQLINSSHFGIEVE
TGEDGKKFAQLVLAQKLDRELEDSYTLQVIARDGGSPPKSGSVTVRVKVLDSNDNSPQFE
LDTIRVELHEDAPVGFLLLRVQAFDPDHGENGDVRYDLAEDESIEIKSTFEVDPVSGAVI
LKSSVDFEERQSYELHIRAYDLGANSVPSTCTVTVEIVDVNDNAPEVTIKPMASRSGDMA
YITEAAAVESFVALVSVTDRDSGANGYVRASLHGHAHFKLQQAYGDTLMIVTTSVLDREK
ISEYNLTVIAEDLGSPPFKTFTQYTIRVSDENDNAPSFSKPVFEISVMENKAPGSYVGSL
VARDPDEGDNGKVTYKLLENEVGVPVSSFLSVDPASGTIYTTRPLDYEYVKQIEVAIHAT
DGGSPPLSSMALVKVRVVDENDNTPFFVHPILINGSADIPLPCNAPAGYVVLKLEGHDND
DAMNAELSYTIMEDEAFLFVVNENTGKMALKRDLALLVGDTLHVRVAVSDRGRTPLFHTA
SLRFVVSDAMPLEEQVVVVLEASQKQNKPNFDASFIIIGLLGAACAILLVAIVAVALSRR
NSQRNVGFIRKISGGNFRKTHLPTHSIDSTDSSSLSGGSVTATEQISSSRDESSFSYEDE
QSRDSDSKMFRPLLSKDQFEPVSLWQGDRYTLQMSEIGSVDLTSMKDSGKGDSDSNDSDF
DSGQAGQKIANTGHQRASSSLYTGVMDGAGVCRTGEVPTHNTSTHVDNSGYTVAYRTLGY
GRHPAAANQGPSFRDYSCNTVFSQTKDYPHAPVFHRMGTQPSYYYQHHVHRQLDKQAASP
REQVTDIISMPVASF
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggagattaagaagtcgctgctaagttttagtttaattgtgatctttgctgcatggaca
gtgagaggcacaacaacaaagtactacacgtatgaagaagacgcaccaggaacctttatt
ggaaatctttccacggatctgaagatcgacgtgtccgaagaccctcacacgagctttcgg
ttcatgcaagagggcaatgcatcattaattcgcatgcgtaaaagcgacgggctgctcacg
gtgggagagcgcattgaccgggagagtctgtgcggctcctcctcgcaatgcgtgatcacc
gcggatgtggtggttttctccatggaaaaattccacctgatccatgtcgaaatccacgtg
agagacattaacgaccacgctcctgtgtttccacgtcgcgagacccggctcgagatttca
gagaacgccgccgtggacgcgcgctttcccatagaagtcgccactgacctggatgttgga
agcaattacatccagagttaccagctcatcaacagtagtcattttggcattgaggtggaa
acaggtgaagatggcaagaagtttgctcagctcgtgcttgcgcaaaagcttgatcgggag
ctcgaagattcttacacacttcaagttattgcacgtgatggcggaagtccaccaaagtct
ggatcagtgactgtgcgcgtaaaagttttggactctaatgacaacagtccgcagttcgag
ctcgacacgattagagtcgagctccacgaagacgcacctgttggttttcttctgctcaga
gttcaagcgttcgaccctgaccacggagaaaatggggacgtgcgctatgacttggcagaa
gacgaatccatcgagatcaaaagcacattcgaagtcgatcctgttagtggagccgtgatc
ttaaagtcttccgtcgacttcgaagagagacaatcttacgagctgcacataagggcgtat
gatctgggcgccaattcggttccttcgacgtgcacggtcactgttgaaatcgtggacgtg
aacgacaacgcgccagaagtcacgattaagccgatggcctcgaggagcggagacatggcg
tacatcacggaggcagcggcggtggaaagtttcgtagcgctcgtgagcgtcacggacaga
gactctggcgcaaacggttatgtgcgcgccagtctgcacgggcacgcgcacttcaaactc
cagcaggcgtacggagacaccctcatgattgtcaccacgtctgttttggaccgggagaag
atttctgaatacaaccttactgtcatagcagaagatctcggctcaccgccgtttaaaact
ttcacccagtacacaatcagagtgagtgatgagaatgataatgctccatcgttcagcaaa
cctgtctttgaaatttcagtgatggaaaacaaagcaccaggatcctacgtgggttctttg
gtagctcgtgatcctgatgaaggagacaacggcaaggtgacatacaagcttctcgaaaat
gaagtcggagtcccagtgagttcttttctgtcagtagacccagcttctgggacgatctac
acgacgaggcctctggactatgagtatgtcaagcagatcgaagtggccatccacgctaca
gatggtggctcccccccactctcgagcatggctctggtcaaagtcagggttgtggatgag
aatgacaacacacctttctttgttcaccccatccttattaatggctcagcagatatacct
ttaccatgcaacgctcctgctggttacgtggtcttgaaactggaaggccatgataatgat
gatgcaatgaacgccgaactctcctataccattatggaagatgaggcattcctgtttgtt
gtaaatgaaaatacaggtaagatggcactaaagcgtgacctggcgcttttagttggagac
acattgcacgtcagagtggcagtaagcgatcgtggccggacacctctttttcacacagcc
tcactccgctttgtggtttcggatgccatgcccttagaagaacaagtggtggtggtactt
gaggcaagtcaaaaacagaacaagcctaattttgatgcttccttcatcatcatcgggctt
ctgggtgctgcttgtgctatattgctggtcgccattgtggctgtcgcgctctcacgcagg
aactctcagaggaatgtcggcttcatcaggaaaatatctgggggaaacttccgaaaaact
cacttaccaacacacagcattgactcgacagattccagcagcctctccggaggtagtgta
acagccactgagcagatttcatcttcgagggatgaatcgtctttctcttatgaagatgaa
caaagcagagattctgacagtaagatgtttcgacctctcctttctaaagaccaatttgag
ccagtttccctttggcaaggagacagatacacactgcagatgagtgaaatcggatctgtt
gatctgacaagcatgaaggacagcggcaaaggagacagcgactccaatgacagtgacttt
gacagcggacaagctggtcagaaaatcgctaacactggccaccagcgagctagcagttcc
ttgtatactggagtaatggatggagctggagtatgcagaaccggagaggttccaacacac
aataccagcactcatgtggacaacagtgggtacactgtagcataccggaccctgggctat
ggccgccatccagctgccgccaaccaaggaccatccttcagagactacagttgtaataca
gtcttcagccaaaccaaagactacccacatgcccctgtgtttcacagaatggggacacaa
ccctcctattactatcaacaccacgtgcacagacagttagacaaacaagctgcatctccc
agagagcaagttacagacatcatcagcatgcctgtagcatccttttaa
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