Ictalurus punctatus (channel catfish): 108258325
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Entry
108258325 CDS
T04658
Symbol
otx2a
Name
(RefSeq) homeobox protein OTX1 A
KO
K09326
homeobox protein OTX1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108258325 (otx2a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108258325 (otx2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
108258325
NCBI-ProteinID:
XP_017312368
Ensembl:
ENSIPUG00000005796
UniProt:
A0A2D0Q238
LinkDB
All DBs
Position
26:17576611..17584728
Genome browser
AA seq
354 aa
AA seq
DB search
MMSYLKQAPYAVNGLGLGGAPMELLHPSVGYPANPRKQRRERTTFTRTQLDILESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSSGSSNSGNSAKIRPAKKKASP
SRESPGSESSGQFSPPAVSSTSSSSSSSSSSSSNSNLGGLGMTSSSASGATPVSSIWSPA
PISPLPAPPSVPDPAPPTSASCMQRAVSGSGGPAGVASYPVSYNQTPSYAQSYPSTASSS
YFGSMDCSSYLAPMHSHHPHHPQLSSMAGSGVSGHHTHPHHPHHLGQSNGHHHPHHHPHA
HTHQGYGGAPLPFTSTDCVDYKDYKDQAASPWKLNFSADCLDYKDQAAWRFQVL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacgccgtgaacggcctggggctcgggggcgcg
cccatggagctcctgcacccttccgttgggtatccggctaatccccggaagcagaggcgg
gagaggaccacgttcacgcgcacgcagctcgacatcctggagtctctgttcgccaagacg
cgttaccctgacatcttcatgcgcgaggaagtggctctgaagatcaacctgccggagtcc
agagtacaggtgtggtttaagaaccggagagccaagtgcaggcagcagcagcagagcagc
gggagcagtaacagtggaaacagcgctaaaatccgccctgcgaagaaaaaagcctctcca
tcacgcgagagtcccggttccgagagcagcggccagttcagtcctccagccgtgtcgagc
accagctcatcctcatcatcctcctcgtcatcctcttcaaattcaaaccttggtggactg
ggcatgaccagcagctccgcctctggggccacgcctgtgtcatctatctggagccccgcc
cctatatcaccccttccggctcctccctccgtcccagatcccgcacctcctaccagtgcg
tcctgtatgcagcgtgcggtgtcaggaagtggagggccagccggagtagcctcctacccc
gtgtcctacaaccagacgcccagttatgcccagagttaccccagcactgcgtccagctcg
tatttcggaagcatggactgtagctcctacctggcacccatgcacagccaccacccgcat
caccctcagctcagctccatggcgggtagcggggtgtctggacaccacacgcacccgcat
caccctcaccaccttgggcagagcaacgggcaccaccaccctcaccatcacccgcatgca
cacacacaccagggctacggcggcgcgccgctgcccttcacctccacagactgtgtggat
tacaaagactacaaagaccaagctgcctcaccatggaaactaaacttcagtgcagactgt
ttggactacaaagaccaggcggcttggcgctttcaggtcctgtga
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