Ictalurus punctatus (channel catfish): 108258334
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Entry
108258334 CDS
T04658
Symbol
msx1b
Name
(RefSeq) homeobox protein MSH-B
KO
K09341
homeobox protein MSX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108258334 (msx1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108258334 (msx1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Menin
Motif
Other DBs
NCBI-GeneID:
108258334
NCBI-ProteinID:
XP_017312379
Ensembl:
ENSIPUG00000015344
UniProt:
W5UED4
LinkDB
All DBs
Position
26:complement(10804503..10806559)
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AA seq
261 aa
AA seq
DB search
MTSPKGAVHFEASPRGKTDSEGEESRAKDAPVSAEEKSKASRHPFSVESLISKKSTCRSA
YSPPAPFPEHLAQYSQRTYFPQKSQAAAETFAHVSDCVNDESEDSSDKEQSTWLKSPTFS
SAQRAASPPSTCHLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLT
ETQVKIWFQNRRAKAKRLHEAELEKLKLAAKPALPAALALPFSLAAHAPPAVYGAAASAL
PRPSLAVPALFGSPYGMYYLS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcctaagggagcggttcactttgaagcgtcgcctcgcggcaaaacggactcg
gagggcgaggagagcagggccaaggacgcgccggtgagcgcggaggaaaaaagtaaagcg
agccgccacccgttcagcgtcgagtcgctcatctccaagaagagcacctgcaggagcgcg
tattctcctcctgcgcctttcccagagcatctggcccagtactctcagaggacttacttc
ccacagaagagtcaagctgcagccgaaacttttgcccatgtgtcggactgcgtgaacgac
gagagcgaagactcgagtgacaaggagcagagcacttggctgaagagcccaactttctca
tccgcgcagagagctgcaagtcctccgtcgacgtgccacctgcgcaagcacaagaccaac
cgcaagccgcgcaccccgttcaccacggcgcagctgctggcgctggagcggaagttccgc
cagaagcagtacctgtcgatcgccgagcgcgccgagttctccagctctctgagcctgacc
gagacgcaggtgaagatctggttccagaacagacgcgcaaaggccaagcgcctacacgaa
gctgagctggagaaactgaagctggctgctaaacccgcactgcccgccgccctggccttg
cccttctccctcgccgcgcacgcgcctccagctgtgtacggcgccgccgcgtccgcgctc
ccgcgcccgagcctcgccgtgcccgcgctgttcggctcgccttatggaatgtattactta
tcctaa
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integrated database retrieval system
