Ictalurus punctatus (channel catfish): 108258351
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Entry
108258351 CDS
T04658
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108258351
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
108258351
TFIIIC, fungi type
108258351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_16
TPR_14
TPR_1
TPR_19
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_MalT
TPR_9
TPR_Slam
TPR_11
ARM_TT21_C
PknG_TPR
ANAPC3
SHNi-TPR
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
108258351
NCBI-ProteinID:
XP_017312408
Ensembl:
ENSIPUG00000006418
UniProt:
A0A2D0Q276
LinkDB
All DBs
Position
26:2333586..2341126
Genome browser
AA seq
903 aa
AA seq
DB search
MSESNPELNDYLEGRISFEEFERRREERIKAKQKVQEDGGDASDENDAAVPSTSKQTRKQ
PAEEGVSPCVQKAFAAMLGEDDEELDDEDEDDGDAEWKDIGEHYTGSGAGGGGGSEVTPG
DVFALEMELNRENKKMMNERRSRSKLPRALRGLMGEANIRYARGEKDDAVLMCMEIIRQA
PLAYEPFSTLAMIYEDQGDSEKALQFGLIAAHLNPSDCDEWLKLADMSLERENVKQAIIC
YSKALKYDQSNVRYLWERSSLYEQVGEHKQAMDGYRRILTLLPPTDGEHFMQLSRDMAKS
YYESSDLPSAIGVMEEALSRHPELVTHESVNMAAELFIANHQYGKALEVLIKFCGIVLER
EADRKETETREEVKEEDTSETTEAKSDLTNSKSGDVLEVVVPDDVPIDIRVKLMVCLIHQ
HVFKPLNPMVTSMMEQSPEELGDLYLDVAEAFMDVGEYGSALPLLAALVCSERYDLAVVW
LLHAECLKALGHLEVAAKSYSKVVEMAPLHLEARLALSTLQQQLGRPDSALKALEPMYDP
DTLAQDSSAAQQELKLFLHRSTLLRSQGRTDDYIDTLLTMLSMLLKVAMVRARVCLIADS
SSGTRHLRLIRVSKNMLDEIEDQEAAYLDVTGKTSVLSREDWWNLLLSCLDVLCEEKRFT
EAELLVDSSLEFYSFYDDRVKRKELEYLGLSAAFLDRNFRKAYDYVRLMLMYTVERAQLW
NIFSQVTLHSQDGRHHRFCLRLMLKNPDNHALCLLNGHTSLVSGTFKHALGQYMQAFRNQ
PCHPLHSLCVGLTFFHMASQKFVTKRHPLVLQGFSFLWRYVEFRGHCQESLYNLGRALHQ
LSLTHLAIHYYQKALSLPPLKLEGIEDDQVDLRREIAFNLSLIYQASGNKEMARYYIHTY
CVI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtcaaaccctgagcttaatgattatttagagggtagaatttccttcgaggag
ttcgagagacggagagaggaacgaataaaagcgaagcaaaaggtccaggaggacggagga
gacgcctctgatgagaacgacgccgccgttccgagcacgtcgaagcagacacgcaaacag
cccgcagaagaaggagtcagcccgtgcgttcagaaagccttcgccgccatgctcggggag
gacgacgaggagctggacgacgaagatgaggacgacggcgacgcggagtggaaagacatc
ggggagcattacacaggcagcggcgctggtggaggcggcggcagcgaggtcaccccaggg
gacgtgttcgctctggagatggagctgaaccgggaaaacaagaagatgatgaacgaaagg
cgatcccgcagtaagctcccgcgtgccctccgaggcctgatgggcgaggctaacatccgc
tacgctcgcggcgagaaggacgacgcagtcctgatgtgcatggagatcatccgccaagct
cctctggcgtatgagccgttctctactctggcgatgatctacgaggatcaaggggactcg
gagaaggcgctgcagttcggcctgatcgccgcgcacctcaacccgagcgactgcgacgag
tggctgaagctggccgacatgtcgctggagcgggagaacgttaaacaggccatcatctgc
tacagcaaagcgcttaaatacgaccagagtaacgtgcgctacctgtgggagcgctcaagc
ctctacgagcaggtgggcgagcacaagcaggccatggacggctaccggcgcatcctcact
ctgctgccccctactgacggcgagcacttcatgcagctgtcgcgcgacatggctaagagc
tactacgagagcagcgacttgccctcagctatcggcgtgatggaagaggctctgtccagg
catcccgagctggtcacgcacgagagtgtcaacatggcggccgagctcttcatagctaac
catcagtacggcaaagccttagaggtcttgatcaagttttgcggcatcgtactggaaaga
gaggcggacaggaaggaaacggagactcgggaggaagtgaaggaagaggacacgagtgag
actacggaagcaaaaagtgatctgacaaattctaaaagcggagacgttttggaggtggtg
gtgcccgatgacgttcctatagatatcagggtgaagctcatggtgtgtctgatccatcaa
cacgtctttaaacctttgaatccaatggtgacgtctatgatggagcagagtccggaggag
ttgggtgatctctatctggacgtggctgaggccttcatggacgtgggcgagtacggctcg
gccttgccgctcctcgctgcgctcgtctgctccgagagatacgacctcgccgtagtgtgg
ctcctacatgcagagtgtctgaaggcccttggccatttagaggtggctgctaagagctac
agtaaggtggtggagatggcacctctgcatctggaggcacgtctggctctctccacgctg
cagcagcagctgggtagacccgactctgccctcaaagcgctggagcccatgtacgacccc
gacacgctggctcaagactcctcggccgcccagcaggagctgaagctgttcctgcaccgc
tccacacttctcagatcgcaaggccgaaccgacgactacatagacaccctgctgaccatg
ctgtccatgctgcttaaggtggcgatggtaagagctcgggtgtgcctgatcgctgactcg
tcttccgggaccaggcatttgcgccttatcagagtatccaagaacatgctggatgaaatc
gaggaccaggaagcggcttacttggacgtgacaggaaaaacaagcgtgctgtctcgggag
gactggtggaatctgctgctgagttgcctcgacgtactgtgcgaggagaaacgcttcacc
gaggccgagctcctcgtcgactcgtcgctcgagttctactcgttctacgacgatcgcgtc
aaacgcaaagagctcgagtacctgggccttagcgccgccttcctggatcgcaatttccga
aaagcgtatgactacgttaggttgatgctgatgtacaccgtggagcgagctcagctgtgg
aacatcttcagccaggtgacgctacactcgcaggatggacgccatcaccgcttctgcctg
cgcctcatgctgaagaacccggataaccacgcgctctgcctgctcaacggccacacgtct
ctcgtctccgggaccttcaaacacgcgctcggtcagtacatgcaggcgttcaggaatcag
ccgtgccaccctctgcacagcctgtgtgtgggcctcacgttcttccacatggcctcgcag
aagtttgtcacaaagagacacccgttggtgctacagggattctccttcctgtggcgttac
gtggagttcagaggtcactgtcaggagagtttgtataatttaggtcgtgctctgcatcaa
ctcagtctgacccacttggccatccactactatcagaaagccctcagcttaccacctctc
aaactggagggcattgaggacgatcaggtggacctgcgcagagaaatcgccttcaatctt
tcactgatttaccaagctagcggcaacaaggaaatggcccgctactacatacacacgtat
tgtgttatctga
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