Ictalurus punctatus (channel catfish): 108258354
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Entry
108258354 CDS
T04658
Symbol
retreg2
Name
(RefSeq) reticulophagy regulator 2 isoform X1
KO
K23880
reticulophagy regulator
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108258354 (retreg2)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108258354 (retreg2)
ER-phagy
ER-phagy recepters
108258354 (retreg2)
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Paralog
GFIT
Motif
Pfam:
RHD_RETREG1-3
DUF7975
Motif
Other DBs
NCBI-GeneID:
108258354
NCBI-ProteinID:
XP_017312415
Ensembl:
ENSIPUG00000006338
UniProt:
A0A2D0Q4X9
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Position
26:2315454..2322393
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AA seq
521 aa
AA seq
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MASGEEAARPSVPSSSSSSSCSPVGLEALFPAACTERSDSPELLRLRRRLQHWLAPHERA
VLYAQRLLVWERPVHSAVAALALNTAFWLLSSTSLRPLFLIGVSLFVFALLDRWKDKLPQ
IAALHAESPGIERESMSVRPRLLSVAELSHHLAESYLTCSLYVQEMLQYKRQNHGKFCVM
TCSGCLLLAVVGHYIPGIMISYIILLSVLLWPLVVYHELIQKMYTGLEPILMKLDYSMKG
DTQHRKHDKRKVKKEQEEGDEPRAETESESEEELSCFAPTVDVKTTALAMAITDSELSDE
EASILESGGFSVSRATTPQLTDVSEGTYLDQQSMHSEPEESFSKDLPEFPSVEEFPSVEP
GVFRFPLGAHEESQSPASLLIQHLASPLHFVNSHFNGQGRGRGGAPGEPEASARTLESLS
EEIVSTAISAVVQNTLSALLSSSEAAEAPGVAEFLPSETPPCPTESALEEAGEGATLVPP
EDEDFELLDQSELEHVDDGLGFVGQVSPTDGASSDRQSQES
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggggaggaggccgcgcgtccgtctgtcccgtcctcctcctcctcgtcctcg
tgcagtccggtggggctcgaggcgctgttcccggccgcgtgcacggaacggagtgacagc
cccgagctcctgaggctccggcggcggctgcagcactggctcgcgcctcacgagcgcgcg
gtgctttacgcgcagagactgctggtgtgggagaggcccgtgcacagcgccgtggccgcg
ctcgcgctcaacaccgccttctggttgttgtcgtctacgtctttgcgtcctctgtttctc
atcggcgtgtccctgttcgtcttcgccctgctggacagatggaaggacaaactgcctcag
atcgctgcgctccacgcagagtcgcccgggatagaacgagagagcatgagcgtccggccg
aggctgctgagcgtggccgagctgagccaccacctggccgagagctacctgacctgcagc
ctctacgtccaggagatgcttcagtacaaacgccagaatcacggcaagttctgtgtgatg
acgtgctcaggatgcctgctgctggccgtggtcggacactacatacccggaatcatgatc
tcctacattattctgctgagcgtcttgctctggcctctggttgtgtaccacgagctgatc
cagaagatgtacacgggattggagccgatcctgatgaagctggactacagcatgaaggga
gacacgcagcaccgcaaacacgacaagagaaaggtgaagaaggagcaggaagaaggagat
gagccgagggccgagacggagagtgagagcgaggaggagctctcctgctttgcccccact
gtggacgtgaagaccacggcgttggcgatggccatcacggactccgagctctccgacgag
gaagcatccatcctcgagagcggaggattctcggtgtccagagccacaacgccacaactc
acagacgtctcagaaggtacctatttggaccagcagagcatgcacagcgaacctgaggaa
agcttctccaaggatctcccggagttcccttcggtggaggagttcccgtctgtcgagccc
ggagtctttcgctttcccctgggcgcccacgaggagtctcaaagcccggccagtttgctc
atccagcacctcgcctctccgctgcacttcgtcaactcgcacttcaacggacaaggacga
ggccgcggcggcgcaccgggcgagccggaggcgtctgctcgcaccctggagtccctcagc
gaagagatcgtgagcaccgccatctccgccgtggtgcagaacaccctctcggccctgctg
agctcctcagaggcggccgaggctcccggcgtcgcggagttcctcccttccgaaacgcca
ccgtgccccacggagtcggctctcgaggaggccggcgagggcgcgacgctcgttccgcca
gaggacgaggacttcgagcttctggaccaaagcgaactggagcacgttgacgacgggtta
gggtttgttggacaggtgagtccgacagacggcgcgtctagcgaccggcaatcgcaggag
tcctag
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