Ictalurus punctatus (channel catfish): 108258406
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Entry
108258406 CDS
T04658
Name
(RefSeq) BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108258406
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108258406
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Gene cluster
GFIT
Motif
Pfam:
Cnd1
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
108258406
NCBI-ProteinID:
XP_047007117
UniProt:
A0A979E3J2
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Position
26:6338371..6364676
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AA seq
842 aa
AA seq
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MKPSYVSYLHHQAMDSDCLNLLPSVCEVLADSTLLLHDDTSLEKLLDYFKELIVRNDEQY
LMQYQPYLLQFLQSVTKLQTVDPSVFSFSLKLAGLLAGKEHSFTLLEERGVLEYMFQPDS
WHTLDLWKNSSVRYGWLQGLWSMLQHPQSIHFFCRNGFLKLVLHLQNDNGHFITSLTGQI
LAHILNTVMPVVLSNSNNTETPNCCPVNSEFASVTEEVMTHVAASLASQEQAVIVPALRL
LATILTQCTEPLRRMFWKHVVGPLELLANVQDDSFTLPIIAVLQAVARSPVLIQPDCRVE
TLMDIMLFSRSAAESVQCAAVILQMEDCPEVFRRKATDVILLPLLCATASPLQLHEPDKL
NGHISRLEKQLSQKAFSVCLLTQSLSSIAEHVCKKSLADIPVQLIASAVIKLLKICTGQC
PFTLEAGTFPHLIGCYKVQQCSIDLLGGLTVYAESMDLIEEAFVVLLQYLQCPDSHATVL
KKTHQATLKWLSICSPSSDLWKMVIHELFQLMKKHVCDARWEVRDSTLEFITQLTADLKG
NSKYTETLHSSGMISALFTSLSDLEGYVQASAMAALGEAVTTFDVGSNVQEKAVTHLLSI
LSQDTQSFPHRAAVKVFTAWLKSPHCCTALEQSISSVLLLGGNDFDWEVKVHTLELADVL
MDRSLNHCPCHFQKIYTSAENKCIMQGLTKLKELGVFEFLFKCLSDCDRPVSQKACSLLL
KLRTLMREITTTTDHKVLTLEICECSWNEEMLHRYHKNRDALEINWVKNGDNASCRDMDG
ADSLNGSPKETDLCQILELLDLEKMHHSLSLSSDHVINSPQSLMEDILFMTKESEENLAD
CY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtcttacgtaagttacctgcatcaccaagcaatggacagtgactgcttaaac
ctactgccgtctgtctgtgaagttttggctgattccacacttttgctccatgatgacaca
tctctggaaaagcttcttgattatttcaaagagctgatagtgcggaatgatgagcagtat
ctcatgcagtatcagccgtatctcctacagttcttgcagagtgtaacaaaattgcagaca
gtagatccgtctgtcttttcgttctcactcaaacttgctgggctgctggcaggtaaagag
cacagtttcaccttgctggaggagaggggagtattggagtatatgtttcagccagatagc
tggcatacgctggatctctggaaaaattcctcagtacgttatgggtggctacagggcttg
tggagcatgttgcagcatccacaatccattcactttttctgcaggaatggattccttaag
ttggtcctccatctgcaaaatgacaacggccatttcattacctctttgactggtcagatt
ttagcacacattttaaacaccgtcatgccagtagtgctgagcaacagtaataatactgag
acaccaaactgctgtcctgtcaacagtgagtttgcttcagttacagaagaagtaatgact
catgtggctgcctcattagcctcacaggaacaggctgttatcgtcccagccttaaggttg
ttagccacaattctcacccagtgtacagaaccactgaggagaatgttttggaaacatgtt
gtgggaccattggaattattagcaaatgttcaagatgactcctttacacttcccatcata
gcagtccttcaagctgttgcaaggagtcctgttttgatccaaccagattgtagagtggag
acactgatggacatcatgttgttttcgagaagtgccgctgaatctgtgcagtgtgcagca
gtgatcttgcaaatggaagactgccctgaagttttcagacggaaagctacagatgtaatc
ctccttcctctgctgtgtgccactgcgtcccctttgcagcttcatgaaccagataagcta
aatggccacatatcacgcttggagaagcagctatcccagaaagccttctctgtgtgtctg
ctcactcagagcctgtccagcatagcagagcatgtatgcaagaaatctttggccgatatt
cctgttcagctgattgcctctgctgtgataaaacttctgaaaatatgcactgggcaatgc
cccttcactctggaagctggtacatttcctcatcttattggctgttacaaggttcaacag
tgcagtatcgacctattaggtggcctcactgtttatgcagagagcatggacttaattgag
gaggcttttgttgttcttctgcagtatctgcagtgtcctgactcccatgctacagttttg
aagaaaacacaccaggccactcttaaatggctcagtatctgttcaccatcatcagattta
tggaagatggttatacatgagctctttcaattaatgaagaaacatgtatgtgatgcacga
tgggaagtgagagattcaactctggagttcattacacagctcacagccgacctcaaaggt
aatagtaaatatactgaaactcttcatagcagtggcatgatctcagcgctcttcacctcg
ctgtcagatttggaaggctacgtccaagcgagtgcaatggcggctcttggcgaggcagta
actacatttgatgtcggtagcaatgtgcaggaaaaagctgtgacccatctgttgagcatt
ctctctcaagatacacagagcttcccacatcgtgctgcagtgaaggtcttcactgcatgg
ctaaaaagcccacattgttgtaccgccttggagcagtctattagctcagtgttgttactc
ggtggaaatgactttgactgggaggttaaagttcacaccctggagttagcagatgtattg
atggacagatcactaaatcattgtccctgtcactttcagaagatctacacaagtgctgaa
aataaatgcataatgcagggcctaaccaaactgaaggaattaggggtatttgagtttctg
tttaaatgcttatctgactgtgacagacctgtttctcagaaagcttgttcactcctgctt
aagctaagaacacttatgagggagattactactactactgaccacaaagttcttactctt
gaaatatgtgagtgcagttggaatgaggaaatgcttcatagataccacaaaaaccgagat
gcccttgagattaattgggtaaaaaatggagacaacgcgtcttgtagggacatggacggt
gcagattctctcaatggatctccaaaagagacggatctgtgccagatattagaactatta
gaccttgagaagatgcaccatagcttatcactaagtagtgatcatgtgatcaattcaccc
caatctctaatggaagacattttattcatgacaaaagagagtgaagagaatcttgcagat
tgctattga
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