Ictalurus punctatus (channel catfish): 108258411 Help Entry 108258411         CDS       T04658                                  Symbol xpo1a Name (RefSeq) exportin-1   KO K14290   exportin-1 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03008   Ribosome biogenesis in eukaryotes ipu03013   Nucleocytoplasmic transport ipu03250   Viral life cycle - HIV-1 Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     108258411 (xpo1a)    03008 Ribosome biogenesis in eukaryotes     108258411 (xpo1a)   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     108258411 (xpo1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ipu03019]     108258411 (xpo1a)    03009 Ribosome biogenesis [BR:ipu03009]     108258411 (xpo1a)    03016 Transfer RNA biogenesis [BR:ipu03016]     108258411 (xpo1a)    03036 Chromosome and associated proteins [BR:ipu03036]     108258411 (xpo1a) Messenger RNA biogenesis [BR:ipu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      108258411 (xpo1a) Ribosome biogenesis [BR:ipu03009]  Eukaryotic type   Pre-40S particles    Export and cytoplasmic maturation factors     108258411 (xpo1a)   Pre-60S particles     108258411 (xpo1a) Transfer RNA biogenesis [BR:ipu03016]  Eukaryotic type   tRNA transport factors    tRNA export factors     108258411 (xpo1a) Chromosome and associated proteins [BR:ipu03036]  Eukaryotic type   Centrosome formation proteins    Centrosome duplication proteins     Regulators of centriole replication      108258411 (xpo1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v Motif Other DBs NCBI-GeneID:  108258411 NCBI-ProteinID:  XP_017312509 Ensembl:  ENSIPUG00000024394 UniProt:  W5UB73 LinkDB All DBs Position 26:complement(17426005..17439683) Genome browser AA seq 1071 aa AA seqDB search MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW TRVDTILEFSQNMKTKYYALQILETVIKTRWKVLPRHQCEGIKKYVVGLIIKTSSDPSVV EKEGVYLAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVSLFTLTMMQLKQMLPL NTNIRMAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRLLM VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL LEAVLIDYQRNVPAAREPEVLSTMATIVNKLAAHITAEIPKIFDAVFECTLNMINKDFEE FPEHRTNFFYLLQAVNSHCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTM LQNVAQEEAAAQSFYQTFFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISI TLNSSTPVNNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV QIKEFAGEDTSDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD NT seq 3216 nt NT seq  +upstreamnt  +downstreamnt atgccagcagatatgacaatgttagcggaccatacagcccggcagctgctggacttctct caaaagctggacatcaacctgctcgacaacgtggtcaactccatgtactacgatgtcggc tctcagcaacggctggcacaggaagtcctgactaacttgaaggatcacccggacgcatgg accagagtggacaccatcttggagttctctcagaacatgaagaccaaatattacgccctt cagattctggagactgtcattaaaacacgctggaaagttcttccgagacaccagtgtgaa ggaattaagaagtacgtcgtggggctgattatcaagacgtcctcggatccttctgtagtc gagaaagagggagtttacctggcaaagctgaatatgatcttggtgcagatcctgaagcag gagtggccgaagcactggcccacgttcatcagcgacattgtgggagcgagtcgcacgagc gagagcctctgccagaacaacatgatcatcctgaagctgctcagcgaggaggtgttcgac ttctccagtggacagatgactcaggtcaaagccaagcacctgaaagacagtatgtgcaac gagttctcccagatttttcagctttgccagtttgtcatggaaaattcccagaatgctcca ctggtccacgccacactggagaccctcctgcgcttcctgaactggattcctctgggctac atttttgagaccaaactcatcagcaccctggtttataagtttctgaacgttccgatgttt cgaaacgtgaccctgaagtgtctgactgaaattgccggcgtcagcgtcaatcagtacgag gagcaattcgtcagcctcttcacgctaacaatgatgcagctcaaacagatgctgcctctg aacacgaacatccgcatggcgtactcgaacgggaaagacgacgagcagaacttcatccag aacctcagcttgttcctgtgtaccttcctcaaagaacatgggcagctgatcgagaagagg cccaacctgcgggagacactcatggaggctctccactacatgctgctcgtgtcagaggtg gaagagactgagatcttcaagatctgtctggagtactggaaccacctggcagctgagctg tacagagagagtccgttcagcacctccacctcaccgctgctgtctggcagccagcatttt gacgtacccccacgcagacacctgtacctgcccgtcctctccaaggtgcgtctcctgatg gtgagccgcatggctaaaccggaggaggtgctggtggtggagaacgatcagggtgaggtg gtgagggagttcatgaaggacacggattcgatcaacctctacaagaacatgagagagaca ctcgtctacctgacccatttggactacgcggatacggagaggatcatgactgagaagctg cacaaccaggtgaacggtacagagtggtcctggaggaacctgaacacgctgtgctgggcc atcgggtccatcagcggagccatgcacgaggaggatgagaaacggttcctcgtcacggtc attaaggacctgctggggctgtgtgagcagaagcgagggaaagacaataaggccatcatc gcttccaacatcatgtacattgtagggcagtacccacggttcctccgtgcccactggaag ttcctcaagactgtcgtcaacaagctgttcgagttcatgcacgagacgcacgacggcgtg caggacatggcgtgcgacaccttcatcaagatcgctcagaagtgcaggaggcattttgtt caggtgcaggtcggcgaggtcatgcccttcattgacgagatccttaataacataaacacc atcatctgcgacctgcagccgcagcaggtgcatacgttctacgaggctgtaggctacatg atcggtgctcagacagaccaggcagtgcaggagcacctgatagagaagtacatgctgctc cccaaccaggtgtgggatagcatcatccagcaggccaccaagaacgtggacatcctgaag gacccggagacggtgcgtcagctcggcagcatcctgaagaccaacgtgagggcgtgtaag gctgtgggtcacccgtttgttgtgcagctgggacgcatctatctagacatgctgaacgtc tacaagtgtctgagcgagaacatctcctctgccatccagaccaacggtgagatggtaaca aagcagcctctcatcaggagcatgcgcacggtgaagagagaaactctgaagctcatctcg ggctgggtcagccgttccaacgatccccagatggtcggggagaactttgttccccctctg ctcgaggccgtgctgatcgactatcagcggaacgtccctgccgctcgagaacccgaagtg ctcagcaccatggcaaccatcgtcaacaagctcgcagcccatattactgcggaaatcccc aagattttcgacgctgtatttgagtgcaccttaaacatgatcaacaaggacttcgaagag ttcccagagcacagaacaaacttcttctacctgctgcaggcggtgaactcgcactgcttc cctgcgtttctgtccatcccgccggcgcagttcaaactggtgctggactccatcatctgg gcctttaagcacaccatgaggaacgtcgctgacacaggtctgcagattctctacacgatg ctgcagaacgtggcccaggaggaggctgcagctcagagcttctatcagacgttcttctgc gacatcctgcagcacatcttctccgtcgtcaccgatacgtcccacacggcgggtttgaca atgcatgcctccatcctggcctacatgtttaacctagtcgaggaggggaaaatcagcata accctgaactcaagcacccccgtcaacaaccaggtctacgtacaggaatatgtagccaac ctgctgaaaactgccttcccacacctacaagatgcacaggtgaaagtattcgtaaccggt ctgttcagtttgaatcaggatatccctgccttcaaagagcaccttcgggacttcctggtg cagatcaaggagtttgccggcgaggacaccagcgatctgttcctggaggagcgagagacg tcgctgcgtcaggctcaggaggagaaacacaaactccagatgtccgtgccgggaatcctc aaccctcacgaactccctgaggaaatgtgtgactga

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