Ictalurus punctatus (channel catfish): 108258436
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Entry
108258436 CDS
T04658
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108258436
03041 Spliceosome [BR:
ipu03041
]
108258436
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108258436
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108258436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
108258436
NCBI-ProteinID:
XP_017312545
Ensembl:
ENSIPUG00000008034
UniProt:
A0A2D0Q5B5
LinkDB
All DBs
Position
26:complement(18424021..18434857)
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AA seq
689 aa
AA seq
DB search
MSDYSSVPPSGAGAAALGAAGIKKDAFADAVQRARQVRETARERPEKNTIAAKIGGDVAG
GPVSNNGGAEGYPFSAQKRSLEDGGIFTHNDQPDSKRMAPQSDRDNATALSISAQLAALS
QQSGRPSAITEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLPDRSVSLTG
SHDSIQKAKMLLDDIVSRGRGTPPTSFHEANGSGHMQEMIIPAGKAGLVIGKGGETIKQL
QERAGVKMILIQDPSQGPNMDKPLRIIGDPYKVQQAREMVQEILRERDQFGGDRNEYGSR
MGGGGGGGGGGGGGGGIEVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPDDGSGPDK
IAHIMGPPDRCEHAAGIINELLQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGNWGPP
GGEMTFSIPAHKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFTIRGNPQQ
IDHAKQLIEDKIEGPLCPVGPGPGGPGPAGPMGPYNPNPYQPGPPGAPPHGGPPGAHQYP
PQGWGNAYQQWQPPAPHDPSKAAADHSAAWAAYYAQYYQQPGGGAMPGQSPSAQPAAPAP
TDQNQVAQNTGQPDYTKAWEEYYKKMGETQAGGGAAPAAGGAPAATGAAGQTDYSAAWAE
YYRQQAAYYGQNPQNPGQPAATQQGQQAQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacagctcggtgccgccttccggggccggagcagcagcactgggagccgcc
gggataaagaaggacgcgttcgcggatgcggtgcagcgcgcgcggcaggtgagagagaca
gcgcgcgagcggcctgaaaaaaacacaattgcagctaagatcggtggagatgttgcaggc
ggccctgtgagcaataacggtggtgccgaggggtatcctttctcagcacagaaacgatcg
ctggaggacggaggtatattcacacataatgatcagccggacagtaagaggatggctcct
cagagcgaccgggacaacgctacagcgctctctatcagtgctcagctggctgctctctct
cagcagagtggacgtccttctgctataaccgaggagtacagagttccggacggcatggtg
ggcctcatcattggtcgaggaggagagcagatcaataagatccagcaggagtcggggtgt
aaggttcagatcgcgccagacagcggaggtttacccgacagaagtgtctctctcaccggg
tctcatgactccattcagaaggccaagatgctgttagatgacatcgtgtcacggggtcgg
ggaacaccgcccacctccttccacgaggccaacgggagcggccacatgcaggagatgatc
atcccggcgggaaaagccggactcgtcatcggcaaaggaggagaaaccatcaaacagctc
caggaacgtgctggtgtgaagatgatcttgatacaggatccgtctcagggaccgaacatg
gacaaaccccttcgcatcattggagatccctacaaagtgcagcaagcgagggagatggtg
caggagattctgcgtgagagggatcagtttggaggagaccggaacgaatatggctcccgc
atgggaggcggtggcggaggaggtggcggcggcggaggaggtggcggaatagaggtgcct
gtacctcgtcactccgtgggcgtggttattggccgaagcggtgagatgatcaaaaagatt
cagaacgatgcaggagtcaggatacagttcaaaccagatgatgggagtggacccgataag
atcgctcacatcatggggcctcctgaccgctgtgagcacgcagccggcatcatcaacgag
ctcctacagagtatccgggtgcgagaggagggaggagggggaccccctggtcctcctggg
acaggtatgcctccgggtgggcgtggcagggggcgtggtccaggtaactggggtccccct
ggtggtgagatgaccttctctatccccgcccacaagtgcggcctggtgattggccgagga
ggcgagaacgtgaagtcgatcaaccagcagacgggcgcgttcgtggagatctcgcgccag
ccgccgcccaacggagaccccaacttcaaactgttcaccatccgggggaatccgcagcag
atcgaccacgccaagcagctcatcgaggacaagatagagggtcctctgtgtcctgtaggt
cccggtcccggtggtcccggtccagctggcccaatgggtccatacaacccaaatccgtat
cagcccggacctccaggagccccaccacatggaggtcctccaggtgcccatcagtacccc
cctcagggttggggaaacgcctaccagcagtggcagccgcctgcacctcatgaccccagt
aaagctgcagcggatcacagtgctgcctgggcagcatattatgcgcagtactaccagcag
cctggtggaggcgctatgcccggccagtcacccagcgcacagcccgctgctcccgccccc
accgaccagaaccaagtggctcagaacacggggcagcccgactacaccaaggcctgggag
gagtactacaagaaaatgggtgagactcaggcaggaggtggcgctgctccagcagcaggt
ggcgctccagcagcgacaggagcagcaggacagactgactacagcgccgcctgggccgag
tactacagacagcaagcggcttattacggccaaaacccacagaaccccggacagcctgca
gccacgcagcagggccaacaggcgcagtaa
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