Ictalurus punctatus (channel catfish): 108258480
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Entry
108258480 CDS
T04658
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108258480
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
108258480
NCBI-ProteinID:
XP_053532116
Ensembl:
ENSIPUG00000005318
UniProt:
W5U7W3
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Position
26:5211860..5215313
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AA seq
689 aa
AA seq
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MLLWIVLLKAALCAALGNSTSDVCKEEICSCSAVEGDLHIDCEKRGFSNLQHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FKKNTFLGLDDLEYLQADFNLLRDIDHAVFRDLSKLEVLILNDNLISALPTNIFQHVPIT
HLDLRGNRIKTLPYEGVLEQIPGIVEVLLEDNPWDCNCDLLSLKQWLENIPQRALVGRVV
CEAPARLQGNELNETAESELCPSKDGVDSSLAAPPTQDETSELDAPPSPTSTTSKMAGVT
EKSAQNNKGRPKARENWQLKMPTAIASGMSDVACPQTCLCKPIGTSQGLGVNCEGKKLES
VLNLRPKPLGAHELNLRDNNIHAVKRNHFRGYTDLNLLDLGGNNIKAIENGTFQNLSELR
WLYMDKNYLDTVMADMFVGLQNLEYLSLEYNDIQLIIAGAFSPMPNLRVLFLNNNLLKLL
PTDTFLGVSLSKISLHNNYFTHLPLSGVLDQLSSIIQIDMHGNPWDCTCTIVPLKQWAEK
MAPDVIVSDLKCESPEEFWKQDFRHIRIDLICPELYEQALPTLLSKNGTIGTDSDSGTRP
GSYPEPSRVSISVLVPGLLLVFVTSAFTVVGMLVFVLRHRKRSKRRDGNSSASEINSLQT
VCDSSYWHGAAYHADHRSYDCGSHSLSDK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtggattgtgttgctgaaggcggctctttgtgcagctctcgggaacagtaca
agcgacgtgtgcaaggaggagatctgctcgtgcagtgcagtagagggcgatttgcacatc
gattgcgaaaagcgcggtttcagcaacctgcagcacttgactggtccgagctcgcagttt
tatcacttgctgctgcatgggaattccctatccagactgtttcccaatgagttcgccaac
ttctacaatgcagtcagcttgcatttggagaacaacggcttacatgacatcgtccctggc
gccttcctcggcctgcagctggtcaagcgcctgcatataaacaacaacaagatccggtcg
tttaaaaagaacacttttcttggtttggatgatttggagtatctccaagctgattttaac
cttttaagagacattgatcatgctgttttcagggacttgagtaaactagaggtcttaatt
cttaatgataacctaattagtgcactccccacaaacattttccagcatgttcccataaca
catcttgacctgcgtgggaaccgaataaagacattgccttatgaaggggtgttggaacaa
attcctggcattgtagaggttttgttggaggacaatccatgggactgcaactgtgacctt
ctttccttaaagcagtggctcgaaaacatcccacagcgggcacttgtcggccgggttgtt
tgtgaagcacctgcgcgtctccagggcaacgaactgaacgagacagccgagtctgagctc
tgcccttccaaagatggcgtcgattccagtttggctgcacctccaactcaggacgagact
tcagaactggatgctcctccttctcccacgtccacaacctccaaaatggccggagtgaca
gagaaaagcgctcagaacaacaagggccgtcccaaagcaagagaaaactggcagctaaaa
atgccaacagcaatagcatcaggcatgagtgatgttgcgtgtccccaaacgtgcctatgc
aagccaatcggcactagtcaaggacttggggttaactgtgaaggtaaaaaattggagagc
gtgctcaatctgagacccaaacctctcggtgcacatgagctaaatctacgtgataacaat
atccatgccgtgaaaaggaaccattttcggggttacacagatctgaacctgctcgattta
ggtgggaataacataaaagcaatcgagaatggcacttttcaaaacttgagcgagttgcgg
tggctttacatggacaagaactatctggatactgtcatggcggatatgtttgtgggacta
caaaacctggaatatctcagtttggaatataatgacatccagctcatcatagcaggagcc
tttagtccaatgcctaacttgcgggtgctgttcctaaacaacaatctgttaaagttgctg
cccacggacacctttctgggtgtctccttgtccaaaataagcctgcataacaactatttc
acccatcttcccttaagtggtgtcctcgatcagctcagctcgatcatccaaatcgacatg
catggaaacccgtgggattgcacgtgcactatcgtgccactgaaacagtgggcggaaaaa
atggcacctgacgtcatcgtgagcgacctaaaatgtgagtcaccagaggagttctggaag
caagatttccgtcacattcgcatagacctgatatgcccggaactttatgagcaggctttg
ccgactttgctgtccaaaaatggcaccattggtacggattccgactcaggaacgcgtcct
ggatcgtaccccgagccaagccgagtctcaatttcagttctggtgcccggattgctgctt
gtgtttgttacttctgctttcactgttgtcgggatgctagttttcgtcctgcgccacagg
aaaaggtccaaacggagagatgggaactcctcggcatctgagatcaactctttgcagaca
gtttgtgactcatcttattggcacggcgctgcttatcatgctgatcacaggagctatgac
tgcggctctcactcgctctctgataaataa
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