Ictalurus punctatus (channel catfish): 108258562
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Entry
108258562 CDS
T04658
Symbol
tuba8l2
Name
(RefSeq) tubulin, alpha 8 like 2
KO
K07374
tubulin alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04210
Apoptosis
ipu04530
Tight junction
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108258562 (tuba8l2)
09143 Cell growth and death
04210 Apoptosis
108258562 (tuba8l2)
09144 Cellular community - eukaryotes
04530 Tight junction
108258562 (tuba8l2)
04540 Gap junction
108258562 (tuba8l2)
09142 Cell motility
04814 Motor proteins
108258562 (tuba8l2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108258562 (tuba8l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108258562 (tuba8l2)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108258562 (tuba8l2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108258562 (tuba8l2)
04147 Exosome [BR:
ipu04147
]
108258562 (tuba8l2)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108258562 (tuba8l2)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108258562 (tuba8l2)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108258562 (tuba8l2)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108258562 (tuba8l2)
Exosomal proteins of other body fluids (saliva and urine)
108258562 (tuba8l2)
Exosomal proteins of colorectal cancer cells
108258562 (tuba8l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
108258562
NCBI-ProteinID:
XP_017312759
Ensembl:
ENSIPUG00000005043
UniProt:
W5ULL4
LinkDB
All DBs
Position
26:complement(3595618..3603894)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPNKKAIGGHDDSFTTFFSDTRAGK
YVPRAIFVDLEPTVIDEIRTGTYRQLFHPEQMISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPSN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGLDSFDEEEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctcagtccacgttggccaggctggtgttcaaatgggaaacacctgc
tgggaactatactgtctggagcatggcatccagcctgatggacaaatgccaaacaagaag
gctattggtggacatgatgactccttcaccaccttcttcagtgatactagagctggcaaa
tatgtacctcgtgctatctttgtggacctggagcccactgtcatagatgagatccgtact
ggtacctaccgccaactgttccacccagagcagatgatctctggcaaagaggatgcggct
aataactatgctcgtggtcactacaccatcggaaaggaaatcatcgactctgtccttgat
cgcatccgtaaactggctgaccagtgcactggtcttcagggcttcctggtcttccacagc
tttggaggaggcactggttctggcttcacttccctcctaatggagcgtctctctgtagat
tttggcaaaaaatccaagctggagttcgccatctacccggcgccacaggtgtccacggct
gtggtggagccatacaattccatcctgaccacccacaccacacttgagcactccgactgt
gccttcatggtagacaacgaggccatctacgacatctgccgcaggaacctggatatcgag
cgtccgtcatacaccaatctcaaccggctcataagtcagattgtgtcctcaatcaccgct
tctctgcgcttcgatggtgccttgaatgtcgacttgaccgagttccagaccaacctggtc
ccatatcccagaatccactttcctcttgctacctatgcaccggtgatttctgctgagaaa
gcttaccacgagcagctgtctgtggccgagatcaccaattcctgcttcgagccaagcaac
caaatggtcaagtgtgacccaagacatggcaaatacatggcctgttgccttctgtaccgt
ggtgatgtggtacccaaggatgtcaacgtggccattgcggccattaagacgaagagaagc
atccagttcgtggactggtgtcccactggattcaaggtgggaatcaactaccagccaccc
actgtggtgcctggaggcgacttggccaaggtccaaagagcggtgtgcatgctgagcaac
actacagccattgccgaggcctgggctcgtctggaccacaagttcgatttgatgtatgcc
aagcgggcctttgtgcactggtacgttggtgaaggcatggaagagggtgagttctctgag
gccagagaagacatggctgccctggagaaggactacgaagaggtcgggctcgactctttt
gatgaagaggaagaaggagaagaatactaa
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