Ictalurus punctatus (channel catfish): 108258587
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Entry
108258587 CDS
T04658
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108258587 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108258587 (setdb2)
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
108258587 (setdb2)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108258587 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108258587 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
108258587
NCBI-ProteinID:
XP_017312790
Ensembl:
ENSIPUG00000011157
UniProt:
A0A2D0Q3C2
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All DBs
Position
26:8146493..8158177
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AA seq
657 aa
AA seq
DB search
MELSAVERAKTFWSQVDVDLAFEELLGFLMCLREAIKNKAASDKGYVQGMNIIMESEVSL
TAALRSDSFEEVLIGEGVIVGEDILTVSVSDSHCTILKMKDLPVPEDALHDDVSRNLESG
SDNSQMSSSGRNDAMLLGKLDTYDYMMLLSPANVLSDDQLAPVSPVQLSYQQHDCSPACL
PHLPSHSDTFLGHNPLQVPLLCHFQRHCAKPLMLSPHEELDSNVLYKAPCGRSLRRMDDV
YQFLQQTKSLGVLHQTNFSFNSQVLPERQAQPRPLAPASPLPTTSISERDISRGIESVPV
TLCNDLDGVRPKEFRYRKDRWPHGCFLSTAPFFLSCCDCTDGCTDSSSCLCLQLSLKAGA
KPDRLYSHHRLNEPVSTGLYECGPWCGCPKSSCQNRVVQHGLRVRLQVFRTNDKGWGVRC
RDDLDKGTFVCTYAGVVLRLGRNLEEPLLSKIQKEEQLSDDEVEVVEEWTLPSGQKKTVT
ETLDTSPRPYVLVIQRPADQPSAPLDGQREQLENSDNQEEMNTCSSPNPSHTEIKHQHKE
EVVRKRLRLDGEENGGDVRRDQMVPKPDCQEKMYYLDASKEGNVGRFINHSCNPNLFVQN
VFVDTHDPKFPVIAFFTCKPIRAGTELTWNYSYKTGSDPEHEVQCLCGSNDCQTIII
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtcggctgttgagagagcgaagacattttggtctcaggtggatgtggacttg
gcttttgaggagctgttgggattcctgatgtgtctgagagaagctattaaaaacaaagct
gcctcggataaaggctacgtccagggcatgaacattatcatggagtcggaggtgtcgctg
actgcagctttgaggtctgattcctttgaggaggtgctgatcggtgaaggtgttatagtt
ggtgaagacatactgacagtgtctgtctcagactcgcactgcactatactgaaaatgaag
gatctacctgtgccagaagacgccttacatgacgatgtctcaaggaacctggagtccggt
tcagacaacagtcagatgtcttcatcaggtcgaaatgatgctatgttattagggaagtta
gacacgtatgactatatgatgctgctgtcgccagctaatgttttatctgatgaccagttg
gcccctgtgtcacctgtccagctttcctatcaacagcacgactgcagcccagcctgtctc
cctcacctcccgtctcactcggacacttttcttggccacaaccccttgcaagttcctctt
ctctgccacttccagcggcattgtgccaagccactgatgctttcaccacacgaggaactg
gactcgaacgtgctctacaaagccccgtgtgggcggagcttgcgccgcatggatgacgtg
tatcagttcttacagcagactaaaagcctcggggtcctgcaccagaccaacttcagcttc
aattcgcaggtactgccagagcggcaggcccagccaaggccgctagcccctgcttcacct
cttcccacaaccagtatttctgagagagacataagccgtgggattgaatctgtcccggtt
actctgtgtaatgacttggacggtgtacggccaaaagagtttcgctatcgcaaggatcgc
tggccccatggctgcttcttaagcacggcgccatttttcctgagctgctgtgactgcaca
gatggatgcacggacagttccagctgtttgtgtcttcagctgtctctaaaggctggcgca
aagccagaccggctttacagccaccaccggctaaatgagcctgtgtccaccgggctgtat
gaatgtggtccatggtgtgggtgcccgaaaagcagttgtcagaatcgtgtggtccagcat
ggactccgtgtccgcctgcaggtgtttcgcaccaatgacaagggatggggcgtgcgctgc
cgtgacgacctcgacaagggcacgttcgtctgtacttacgcaggtgttgtcctgagactc
gggcggaacttagaggagccgcttctctcgaaaatccagaaggaggagcagttgtcggat
gatgaggtggaggtagtggaggagtggacgcttccctcagggcagaagaaaacagtcact
gagaccctggacacctctccacgtccttatgttcttgtgatccagaggcctgcagaccag
ccctctgcaccgctggatggccagagggaacagctggagaattcggataaccaggaggaa
atgaacacctgttcatcgcctaatcccagtcatacagaaatcaaacaccagcacaaggaa
gaggtggtgaggaagaggcttcggttggatggcgaggaaaacggtggcgacgtacgtcga
gatcagatggtgcctaaacccgactgtcaggaaaaaatgtattatcttgatgcttcaaaa
gaaggaaatgtgggaaggtttattaatcacagctgcaatcccaacctctttgtccagaat
gtctttgttgatacccacgatcccaaattcccagtaattgctttctttacgtgcaagcca
atcagggcagggactgagctgacctggaattattcctataaaacaggaagtgatcccgag
cacgaggtccaatgtctgtgtggttcgaatgactgccaaacgattatcatctga
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