Ictalurus punctatus (channel catfish): 108258602
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Entry
108258602 CDS
T04658
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu03273
Virion - Lassa virus and SFTS virus
ipu04140
Autophagy - animal
ipu04142
Lysosome biogenesis
ipu04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108258602 (lamp1a)
03272 Virion - Hepatitis viruses
108258602 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108258602 (lamp1a)
04142 Lysosome biogenesis
108258602 (lamp1a)
04140 Autophagy - animal
108258602 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108258602 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108258602 (lamp1a)
04090 CD molecules [BR:
ipu04090
]
108258602 (lamp1a)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108258602 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
108258602 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
108258602 (lamp1a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108258602 (lamp1a)
CD molecules [BR:
ipu04090
]
Proteins
108258602 (lamp1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
BIM1-like_dom
DUF1804
Motif
Other DBs
NCBI-GeneID:
108258602
NCBI-ProteinID:
XP_017312814
Ensembl:
ENSIPUG00000010750
UniProt:
A0A2D0Q3D3
LinkDB
All DBs
Position
26:complement(8047872..8064400)
Genome browser
AA seq
412 aa
AA seq
DB search
MTHRLPSVSAISCFIVLGWLTAAHAVTFEVKNGNSTCIKADISANFTITYNSTTNVTKTV
VVPLPESAVVGNGSSCGDSPALQASFGDGHSLDLVFSSDGHIYRVANLNLTYNLSDNATF
PGSSSKEIMVLTTNTSGIAAQLNTTYRCMSSSSVSLGGPGVTVTFFDIRLQAYMPSANLS
TNETICSADIPSTTAAPTTTPITSTTPVTPTNPERGNYSVENSTSACLLARMGLQLNLTY
LSRNQNKTVVAIRNVVPSRMVASGSCESTTATLQLTGDLANLTFMFTLNSTTKKYQLSAL
NMSASWDDMRDPFKVSNSSLQYMQGTLGRSYMCNIEEVFPVVSTFSLNTFDLQVQPFGVH
DNQFGPADVCPMQKDNMLVPIIVGASLAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagactaccgtcagtctccgccattagctgctttattgtcttaggctggctg
actgcagcgcacgccgtaacatttgaagtaaagaatgggaattctacctgtatcaaagcg
gacatctcggctaacttcaccatcacgtacaacagcaccaccaatgtgacgaaaacggtg
gttgtgccgctcccggaatcagcagtagtgggaaatggcagttcctgtggagactctccg
gccctgcaggcctccttcggtgatggtcactctctggacttggtgttctccagcgatggc
catatatatcgtgtggccaatcttaatctgacctacaacctgagtgacaacgccaccttc
cctgggtcgtccagcaaggagatcatggtgttgactacgaacacgtctgggatcgcagca
cagctcaacaccacctacaggtgtatgagctccagctcagtcagtctgggaggccctgga
gtgacggtcacgttcttcgacatccgcctgcaggcctacatgcccagcgccaacctgagt
actaacgagacgatttgttcagctgatattccttccaccactgctgcacccactaccact
cctatcacctcgaccacccccgtcaccccaaccaaccctgagcgcggcaactacagcgtt
gaaaacagcacgtctgcctgtcttctggctagaatggggctgcagctgaatctaacatat
ctctccaggaatcagaataaaactgttgtggcgataaggaacgtggtgcccagtcgtatg
gttgccagcgggtcatgtgaatccacaactgctactctgcagctgactggagatctcgcc
aacctcactttcatgttcacgctgaactccaccaccaaaaaataccagctcagtgctttg
aatatgtctgccagttgggacgatatgagagatccattcaaagtcagcaacagcagtcta
cagtacatgcagggaaccctgggccgctcctacatgtgcaacattgaggaggtttttcct
gtggtcagcactttctccctcaacaccttcgacctgcaggtgcagcctttcggcgtccac
gacaaccagtttggaccagccgacgtgtgtccaatgcagaaggacaacatgctggtgccc
attattgtcggtgcctccctggctggcctcgtcctcatagtcctcatcgcctacctgatc
ggcaggaagaggagtcacgcaggctaccagaccatctaa
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