Ictalurus punctatus (channel catfish): 108258611
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Entry
108258611 CDS
T04658
Symbol
pknox1.2
Name
(RefSeq) homeobox protein PKNOX1 isoform X1
KO
K24891
homeobox protein PKNOX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108258611 (pknox1.2)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108258611 (pknox1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Meis_PKNOX_N
Homeobox_KN
Homeodomain
DUF7645
Motif
Other DBs
NCBI-GeneID:
108258611
NCBI-ProteinID:
XP_017312836
Ensembl:
ENSIPUG00000020239
UniProt:
A0A2D0Q561
LinkDB
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Position
26:12472644..12488539
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AA seq
424 aa
AA seq
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MQEEEHSVGETDERLDEEEEREEEEEEESGPVPADPQTPMEAQKAAIYRHPLFPLLALLF
EKCEQSTQRSECVTSASFDMDIQNFVRSQDKESKSFFSEDPELDNLMVKAIQVLRIHLLE
LEKVSDLCKDFCSRYIACLKTKMNSETLLSSTDPASPYSPTQAQTPSSFSGTMSPQGIVV
PTSALQQGLTVTAVNPTQVVSGGTVYQPVTVVTPQGQVVTQALSPGTIRIQNSQLQLQLN
QDLSFLSQDENSSKTKRGILPKHATSVMRSWLFQHIGHPYPTEEEKKQIALQTNLTLLQV
NNWFINARRRILQPMLDASSSEAPKNKKKTPQTRPLQRFWPDSLASSVSQQQVTMEDGTM
VSVSMVGGEDGLQTLSSDGATLAMQQVMMGGHSEDDEDDDDEEEEDNLSHSDMTRLGLET
SDSL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggaggagcactcagtgggagagacagatgaaaggttggatgaggaagaggag
agagaggaggaggaagaggaggagagcggcccggtgccagccgacccccagacacccatg
gaggcccaaaaagccgccatctacaggcaccccctgttccccctgctggcacttttgttt
gagaagtgtgagcagtccacgcagcgctccgagtgtgtgacgtcggccagcttcgacatg
gacatccagaactttgtgcggagtcaggataaggagagcaagtccttcttcagtgaggac
cctgagctcgacaacctgatggtgaaggcaattcaggtgttgcgtatccacctgctggaa
ctggagaaagtgagcgacctgtgtaaagacttctgcagccgctacatcgcctgcctgaag
actaagatgaacagcgagactctactgagcagcactgatccggccagtccatactcgcct
acacaggctcagactcctagctctttctctgggactatgagtccgcagggaatcgtcgta
ccaacatccgccttacaacagggccttactgtgacggcggtaaaccccacacaggtggtg
tcaggtggcacggtctatcagcccgtaactgttgtgactccacaaggccaggtggttacc
caggccctctcacctggcacaatacgcatccagaactcacagctccagttgcagctgaac
caggatctcagcttcctgagtcaagatgaaaactcgtctaagacaaagcggggcattctg
cccaagcacgccaccagcgtcatgcgttcctggctcttccagcacatcgggcatccatat
cctacagaagaagagaagaagcagattgcactgcagactaacctcaccctgctgcaagtc
aacaactggttcatcaatgcgcgaaggcggatcctgcagccgatgctggacgccagctca
tcggaggcgccgaagaacaagaagaaaacaccacagactcgtccacttcagcgcttctgg
ccagactcccttgcttcctcagtctcccagcaacaagttaccatggaagatggtaccatg
gtatcagtcagcatggtaggaggagaggacgggctgcagacgctgtcgtcggatggagca
acgctggccatgcagcaagtgatgatgggaggccacagcgaggatgatgaagacgacgat
gatgaagaagaagaggacaatctatcccactccgacatgaccaggctaggtcttgaaacc
agcgactcactgtag
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