Ictalurus punctatus (channel catfish): 108258698
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Entry
108258698 CDS
T04658
Name
(RefSeq) transformer-2 protein homolog alpha isoform X2
KO
K12897
transformer-2 protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108258698
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108258698
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108258698
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108258698
Spliceosome [BR:
ipu03041
]
Common components
Common spliceosomal components
SR proteins
108258698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
108258698
NCBI-ProteinID:
XP_017313005
Ensembl:
ENSIPUG00000022183
UniProt:
A0A2D0Q6N0
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All DBs
Position
26:complement(14372795..14383259)
Genome browser
AA seq
292 aa
AA seq
DB search
MHGRFSLWFCCVHLVWIVQESRSRSVSPRGSVKSTSNSPGRSKDGSHRSRSRSKSRSRSR
SKSRSRSRSHRSSRRRHSRSRSRRRHSRSRSYSREYRRSRSHSPMSNRRRHVGNRANPDP
NCCLGVFGLSLYTTERDLREVFSKYGPLSNVSIVYDQQSRRSRGFAFVYFENKEDSKEAK
EQANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGGGGGGRPSTSSSRSRDCY
DRGYDRGYDRGYDRYDDREYYKSYRRRSPSPYYGRGGYRSRSRSRSYSPRRY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggaggttctcgctctggttctgttgtgttcatttggtttggattgtgcaggag
tcccgctctcggagtgtgagtcccagaggctctgtgaagtcgaccagcaactcgccagga
agatctaaggatggctcccaccgctcccgctccagatccaagtctcgctccaggtccagg
tcgaagtccagatccaggtcccgttcccacaggagctctcgccgtcgtcactcacgctca
cgctctcgccgacgccactcgcgcagccgctcgtacagtcgcgagtaccgacgcagccgc
agccactcacccatgtccaatcgcagacggcatgtcggcaaccgggcgaaccctgacccc
aactgttgcctgggtgtgttcggcctgagcctgtacaccaccgagcgcgacctccgagaa
gtgttctccaaatacggccccctgtccaacgtcagcatcgtgtacgaccagcagtctcgc
cgctcacgtggtttcgccttcgtctacttcgagaacaaagaggactccaaggaggctaaa
gagcaagccaacggcatggagctggatggccggcgtatccgagtggacttttccatcacc
aagagaccacacacccccacacctgggatttacatgggacggccaacctatgggggtggt
ggtggcggcggcggcggaggaagacccagcacgtcctccagtcgctccagagactgctac
gatcggggatacgaccgaggatacgaccgaggatacgaccgctacgacgatcgggaatac
tacaaatcctacaggcgcaggtctccttcgccctactacggccgtggaggatacagatcc
cggtcccgctcacggtcctactcgccacggcgctactga
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