KEGG   Ictalurus punctatus (channel catfish): 108258705
Entry
108258705         CDS       T04658                                 
Name
(RefSeq) DNA excision repair protein ERCC-5
  KO
K10846  DNA excision repair protein ERCC-5
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108258705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108258705
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108258705
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc Clr2_transil
Other DBs
NCBI-GeneID: 108258705
NCBI-ProteinID: XP_053532353
Ensembl: ENSIPUG00000010031
UniProt: A0A9F7TGR5
LinkDB
Position
26:7583552..7601195
AA seq 1107 aa
MGVHGLWKLLQSTGKPINPETLEGKILAVDISIWLNQAVKGVRDRDGNNVHNAHLLTLFH
RLCKLLFFRIRPVFVYDGDAPLLKRQTLAVRRQRKEEMALESKQTREKLLRTFLKRQAIK
AALGDRSQETIPSISSARRDEVDEMYALPALPPAEEEERSSSDEEPERDEAQTQEPSHTF
QDEIYDDPNSVDINSEDFHLLSPEIKHEILKDMKEFSKRRRTLFHKPPEKSGDFSQYQLA
GLLQRNNLNQRLEGVEKEMSQRRCGAVEEEYGQSDEHDVESRRLLSEDSSHYILVKGSRK
SSEASESHPAPDPWSCGSWSRKGKLQGRPEPLWRPVSDGIREENEPTSSSSSSTTPKPII
CSEEQPSDGAPPSPRTLRAIQAAMMDSSSDEDELASKKMIRDGCGKVSSRDGNGGVSPRT
LQAIQRALMEDNNVSEDLCRAVQSQQKKYVIVSSSDDDDDQTESTVVERSILGEAREAGG
VSPQTLLGLQRALGEKESFTGIKQVEHVGFLSSSEGEEMEEAVGVRSKEFKAATHTKEEE
HAKGALKTAFSPSPLQPDQDNLPQDHESSCNSENNFLQKGSLNVNLTEETEGRNGPMIVK
SEEEDSSSEGFVEVSEGEEVSESDNSGTKSEERLAEMSNKEEVVGSDEEESQENESSDGS
LSLNTRTVEEQEPGSSREAAAVPAPSEWDNIDMEELVQLEKNLQAEQSSLRGQQQQQQRS
AATVTGQMCQESQELLRLFGVPFIVAPMEAEAQCATLDRTDQTHGTITDDSDVWLFGGRH
VYKNFFSSNKYVEHYQYLDIQNQLGLDRTKLINLAYLLGSDYTEGIPGVGYVTGMEILNE
FPGPGLEPLTQFSKWWNEAQTSKKLAADPKHTKVKKKLKGLSLHAGFPNPAVAEAYLQPT
VDQSESSFCWGRPQLDLLKEFCYSRFGWNSRKTEETLQPVLKQLSTQQTQLRIDSFFRLE
QQERQAIQSQRLRRAVTCLKRKERDGADNEAESSEDEKVSPVKKGKNAKEKGTDVTPAGM
FGGGFIGLDMSSNRPEEKVIVDEVEKQPKTVKSELLKAQSNSSSSSSSEDELEHKNRATM
ITAQSVFEGKTRGRGRRGGRGKTKKNF
NT seq 3324 nt   +upstreamnt  +downstreamnt
atgggagttcatggcctgtggaaattactgcagagcacaggaaagcccatcaacccggaa
acactcgaggggaagatcctagcagttgatatcagcatctggctaaaccaagcagtcaaa
ggggtgcgggatcgcgatggcaacaacgtccacaacgcccaccttcttacgctgttccac
cggctgtgcaagttgctgttcttccgcatcaggcctgtctttgtttacgatggagatgca
cctctgcttaagagacagaccctggccgtcaggagacagaggaaggaggagatggctctt
gagtccaagcaaacccgtgagaagctcttgagaacgtttctgaagaggcaggccatcaag
gctgcactaggggaccgcagtcaagaaacaattcccagtatttcttctgcacgaagagat
gaggtggatgaaatgtacgctttaccagcactgcctcctgcagaggaagaagaaaggagc
agttctgatgaagaaccagaacgagatgaggcacagacacaagagccctctcacacattc
caggacgagatttatgacgatcccaattccgtagacataaactctgaggatttccacctc
ttgtcaccagagatcaaacacgagattctcaaagacatgaaagagttcagcaagagaaga
cgcacactttttcacaaacctcccgagaagtcaggggacttctctcagtatcagctggca
gggctgctgcagaggaataacctgaaccaacgtctagaaggtgtggagaaagaaatgagc
cagagaagatgcggagctgtggaggaggagtacggccagagtgacgagcacgacgtcgag
tcacgccgtctcctatctgaggattcttcacactatatactcgtcaaagggtcccgaaag
agctcggaggcttctgagagccatccagccccagatccctggtcttgtggctcttggtca
aggaaagggaaactccaaggaaggccagaaccgctttggcgcccggtatcagatggcatt
cgtgaggaaaacgagccgacttcttcctcttcttcatcaacaactccaaaaccaatcatt
tgtagcgaggaacagccttcagatggagcgcctccttccccacgaacccttcgggccatt
caggcagccatgatggacagcagctcggatgaagatgaattggcctctaagaaaatgatc
cgagatggatgtggaaaagtaagttctcgagatggaaatggcggagtgtcacctcgcacc
ttgcaggccattcagagggccctgatggaggacaacaatgtatctgaagacctctgcaga
gcggttcaatctcagcagaagaagtatgtcattgtcagtagctctgatgatgatgatgat
caaacagaaagcacagtggtcgaaaggagcatcttgggtgaggctcgggaagcaggtgga
gtttctccgcagactttgctgggccttcagagagccttaggagaaaaagagtcatttacc
gggattaagcaggtggagcatgtgggcttcttgagcagttctgaaggggaggaaatggaa
gaggcagttggagtaaggagcaaggagttcaaagctgctacacatactaaggaagaggag
catgccaaaggtgccttaaaaacagctttctccccctcacctctacagcctgatcaggac
aacttgcctcaagaccatgaatcgagttgtaattctgaaaacaatttcctgcagaaagga
agtttgaacgttaacttaaccgaggagacagaggggagaaatgggcccatgatcgtaaag
agtgaagaggaggacagcagctccgaaggtttcgttgaggtttcagaaggagaagaggtg
tctgaatcggataattcaggaaccaaatcagaagaacgcttagcagaaatgagtaataaa
gaggaggtggtgggaagcgatgaagaggagagccaagagaacgagtcaagtgacggaagt
ctgtcattaaacacccgtacagtggaagaacaagaacctggaagctctcgagaagcggcc
gctgttcctgcgccgagtgagtgggacaacattgacatggaggagctggtacagttggag
aaaaatcttcaggccgagcagagcagcctgcgcgggcagcagcagcaacagcagcgcagc
gctgcgacagttacaggacagatgtgccaggagagccaggagctgttgcggttgttcggt
gtgcccttcatcgttgctccgatggaagcggaagctcagtgtgcaactttggaccggacg
gaccagacgcacggcaccatcactgacgacagtgacgtctggctgttcggaggacgacac
gtctacaaaaacttcttcagcagcaacaaatacgtggaacactaccagtatctggatatc
caaaaccagctaggactggacaggactaagctgatcaatctggcctatctactgggtagt
gattacaccgaggggatcccaggagtcggatacgtcacaggcatggaaatactaaacgag
ttccctgggcctggtttagaacctctcactcagttcagtaagtggtggaatgaagctcaa
accagtaagaagctggctgctgatcctaagcacacaaaggtgaagaaaaagctaaaaggc
ttgagtcttcatgcaggcttccccaaccctgctgtcgctgaggcctacctccagcccact
gtcgaccaatcagagagctcattttgctggggccgcccacaactggatctcctcaaagag
ttttgctacagtcgatttggttggaatagcaggaaaaccgaagaaactcttcaaccagtc
ctaaaacagctcagcactcaacagactcagctgcgcatcgattccttcttccgtctggag
cagcaggagaggcaggccatccagagccagcgcttacgtcgagccgtcacctgcctcaag
aggaaggagcgcgatggagcagataatgaagcagagagcagtgaagatgagaaggtctca
ccagtcaagaaagggaagaacgccaaagagaaaggaactgatgttacgcctgcagggatg
ttcggaggaggttttattggcttggacatgagttctaatagaccggaagagaaggtgatc
gtggacgaggtcgagaagcagcctaaaacagtaaagagtgagctgttgaaagcccaatcc
aacagcagcagcagcagtagttcagaagatgaactcgaacataagaatagagccactatg
attaccgcacagtctgtatttgaggggaaaacaagaggaaggggaagaagaggaggaaga
ggaaagaccaagaaaaacttctaa

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