Ictalurus punctatus (channel catfish): 108258708
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Entry
108258708 CDS
T04658
Name
(RefSeq) complement C3
KO
K03990
complement component 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04145
Phagosome
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108258708
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108258708
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108258708
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108258708
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108258708
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108258708
Peptidases and inhibitors [BR:
ipu01002
]
Peptidase inhibitors
Family I39: alpha2M family
108258708
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
Opsonins
108258708
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108258708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
MG1
A2M_recep
A2M
NTR
MG4
MG3
MG2
ANATO
C3_CUB2
Transglut_C
SQHop_cyclase_C
Motif
Other DBs
NCBI-GeneID:
108258708
NCBI-ProteinID:
XP_017313028
UniProt:
A0A2D0Q2S0
LinkDB
All DBs
Position
26:complement(18799392..18826624)
Genome browser
AA seq
1649 aa
AA seq
DB search
MHVDLVWLTATLLSFPLLTLCDPLNVLLAPNLLRIGTPERVFVEAQDYSGNDLQVKIIVK
NHPQGNTELTSESVTLNAANNFQAVVNIVIPDNKNFFSDDPLEKQYVILQAQFPSGLLEK
VALVSFQSGYIFVQTDKSIYTPGTEVRYRTFSLTPDLKPTDQTGGIYVEILNSQGITINR
ETIFPKQGTIKGSYSIPEIAKPGIWSVVTRYKNTPQKNFTAEFEVKEYVLPSFEVALKSS
KSFFYVNDPDLQVDITAKYLFGRDVDGVAFVVFGVKRDDSKHPLPASLQRQTIRKGEGRA
VLTKEMIQRSFPNIVDLVGDSLYISVSVLTETGSEIVEAEKGGIQIVTSPYTIQFKRTPK
FFHPGMSFDVTVYVTNPDQSPAENVEVLVKPGDVRGRTKSNGMAKVIVNTQGEDKTLQIT
ARTTAPDIPDERQAENKMTAQAYTTKGNSNNYLHISIDAAELKINDQININLNFKSSAQT
QDFTYLILSKGQIVRAERFKRQGQSLVTLSLPVTKDLVPSFRVVAYYHVGSSEVVSDSVW
VDVKDTCMGTLKLDVKESLNVKKVFEPGDEFHLIVTGDPSAKVGLVAVDKAVFVLNKNRL
TQSKVWDIIEKHDTGCTAGSGTNDMGVFYDAGLLFQSDKAGGTNIRSDPACPAPPKRKRR
AVTLLQITQTLVGKYTGEQKKCCGDGLRSNRLGYSCDRRANFILDGSECVQAFLDCCTEI
QKHRENQEELLHLARSEDDDDDYISSDEIVTRTQFPESWLWDDIDLPACARNLQCDSTSL
TLSTNYLKDSITTWQVLAISLSKTHGICVADPYEITVAKDFFIDLKLPYSAVRNEQLEIK
AILYNFSNKKQKVRVEFFETEHVCSAASKKSKYRLTVNIDPKSTRAIPYVIIPMEIGLHD
IEVQAATATLHDGVRKKLKVVSEGVLTELPEQNLELNPSRVPGGVQVLHLKTEVPNGQVP
NTPAQTYITVAGQEVSQTVEQAISGNFMGKLIVQPHGCGEQTMIYMTLPVIATHYLDTTK
QWEGVGVQRRSEAIQHIQTGYARELTFRKPDGSYAAWINRPSSTWLTAYVAKVFALASDL
ISIDENVLCGSIKWLILNAQLPDGEFKESAPVYHAEMVGGVRGKDADASLTAFVLIALQE
ANHLCGKLVGSLPESSKKAIAYLERRLPSLTNQYAVAISSYALANAGNFNRDRLLQFSSE
DGAYWQVSGGHHFSLEATAYAVLALVKAKEFDAAGKAVNWLNRQSSPYGGHGTTQATIIV
FQAVAEYYKQVRAGQNADLDVEVSVSGRKRAIRWTFTRNNAHLTRSDKVQLKQEFNITAK
GTGAGVLKVVTLYYARPIEKKSDCTKYDLKVELKRERLVSYPDALESYEVIIDVLFKDPN
RDATMTILDIGLLTGFVVDEKDLTDLTSGRDKYIQKFEMDKQLSERGSLIIYVDKISHTV
PDRIAFRVHKITSVALLQPAAVSVYEYYSPGERCVKFYHPVKKDGALNRLCSDQQDLCQC
AEENCSIQKKQKINEQDREKKACEADMDYVYKVKVLGVDQNPNTDFYEMKIEEVLKEGSD
PDVREKVRSFMGHANCRESFGFEEGKSYLIMGRSVDLPRIDEKLQYILGEQTWIEYWPTR
EEGQTPAYKDKYIGISGLAQTLTDFGCTT
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggacctggtgtggctgacggctacgcttctctccttccccctgctcacgcta
tgtgacccactcaacgtcttgttggcgccgaacctgctgcggattggcacccctgagaga
gtgtttgtggaggcgcaggattatagtggaaatgacctccaagtaaagatcatcgtgaag
aaccacccacagggaaatacagaactgacatctgaatctgtcaccctcaatgctgctaac
aacttccaggctgttgtaaacatagtgattcctgacaataagaacttctttagcgatgac
ccactggagaagcagtacgtgatcctgcaggctcagtttccttcaggcttgctcgagaaa
gtggccctggtctccttccagtctggttacatattcgttcagacagacaagagcatctac
acacctggaacagaagttcgttaccgaaccttctctctgactcctgatctgaagcccact
gaccagactggaggaatctatgtagaaatcctaaattctcaaggcatcacaattaacagg
gaaacaatctttcctaagcaagggaccataaaagggtcatacagcatccccgaaattgcc
aaacctggaatatggtctgtagtaacgcggtataaaaacaccccacagaagaacttcaca
gctgaatttgaagttaaagaatatgtgctaccgagctttgaagtagcgttaaaatcatcc
aagtcttttttctatgtgaatgatccagaccttcaagtggacataactgccaagtacctg
tttggcagagatgtggatggtgttgcgtttgttgtgtttggagttaagagggatgactct
aagcaccccttgcctgcctctttacaaaggcaaacgatcaggaaaggagagggacgtgca
gtgctcactaaagagatgatccagcgttcctttccaaatatcgttgacctggtcggagac
tctttgtacatttcagttagtgttttaactgagaccggtagcgaaattgttgaagcagag
aaagggggcattcaaattgtgacatcaccctacaccatccagttcaagagaaccccaaaa
ttcttccaccctggaatgtctttcgatgtcacggtttatgtgaccaatcctgaccagtca
cctgctgaaaatgtggaagtgttggtcaagcccggtgatgtgaggggtcgaaccaagagt
aacggcatggccaaggttatagtgaacacccagggagaagacaagactctacaaatcacc
gcaagaaccacagccccagacataccagatgaaagacaagcagaaaacaagatgactgcc
caggcttacaccaccaaaggaaactccaacaattacctacatataagcatcgacgctgca
gaactgaaaatcaatgatcagataaacatcaatctaaacttcaaaagtagtgcccaaact
caagatttcacttatctgatccttagtaaaggacagattgtgagagcggagaggtttaag
agacaagggcagtcgctagtgactctgtctctacccgtcaccaaggacctggttccctca
tttcgagtggtggcgtattaccacgtaggatcttctgaggtcgtgtcggactcggtctgg
gtcgacgtgaaggacacatgcatgggaacgctcaagctggatgtaaaggagagtttaaat
gtcaagaaggtatttgagcctggtgatgagtttcatctcatagttactggagatccaagt
gccaaggttggtctggtagcggtggataaggctgtctttgtcctcaacaagaacagactc
acacagagcaaggtctgggacatcattgagaagcatgatactggctgtacagcaggcagt
ggtacaaatgatatgggtgttttctatgatgcaggtctgctgtttcagtctgataaagca
ggaggtaccaatataagatcagatcctgcatgtcccgccccaccaaagagaaaacggaga
gctgtgactctactacagatcacccaaacactggttggtaaatataccggcgaacagaag
aaatgctgtggtgacggactgaggtcgaaccggttgggctactcatgtgatcggagagct
aacttcattttggatggttccgagtgtgtccaggccttcctggactgctgtacagagatc
caaaaacacagggaaaaccaggaagagttgttgcatctggctcgcagtgaagatgatgat
gatgactacataagttctgatgaaattgttacccgaacacagttccctgagagctggctg
tgggatgacatagacttgccagcctgtgcaagaaacttacaatgtgattcaacaagcctc
acattgtccacaaactatctaaaagactctattactacttggcaagtcctagccatcagt
ctgtctaagacccatggaatctgtgtggctgatccctatgaaataacagtggcaaaagac
ttcttcatagatctcaagttaccttactcggcagtacgcaatgaacaactagaaatcaag
gctattctttataacttctccaataagaaacagaaggtccgtgtggaattctttgagacg
gagcatgtttgcagcgcagccagcaaaaagagcaaataccgtctcacagttaacattgac
cccaagtccacaagagccatcccatatgtgattattcccatggaaatagggctccacgat
atagaggtgcaggctgcaactgcaacacttcatgatggagtaaggaaaaaactgaaggtt
gtgtctgaaggtgtcctaactgaactcccagaacaaaatttggaactaaatccttctcga
gtacctggtggtgttcaagttctgcatttgaagactgaggtaccaaatggacaagttcca
aacactcctgcacaaacttacatcactgtggctggtcaggaggtgagtcagacagtcgag
caagccatcagtggaaattttatggggaaactaatcgtacagccccatggctgtggcgag
caaaccatgatctatatgacattgcctgttattgccacacactacttggataccaccaag
cagtgggaaggagttggtgtgcaacgacgtagtgaggctatccagcacatacagacagga
tatgcacgagaacttacattccgtaaaccagatggttcctacgctgcatggataaataga
cctagcagcacatggttgacggcatacgtggccaaagtctttgctctggccagtgacctc
attagcatagatgaaaatgttctctgcggttccatcaagtggttgattctaaatgcacag
ttgccagacggcgagtttaaagaaagtgctccagtgtatcatgccgagatggtcggtggt
gtacgaggtaaggatgctgacgcctctctgacagcgttcgtcctgattgccctgcaagaa
gcaaaccatctttgtggcaaattagtcggaagtcttccagagtcttccaagaaagccatt
gcatatttggaacgtaggctcccctctttgaccaatcagtatgcagttgctatatcttcc
tatgccttggccaacgctggcaattttaacagagatcgcctgctgcagttctcctctgaa
gacggtgcatactggcaagtttctggaggacatcacttctccctggaggcaacagcatat
gctgtgctggctctagtaaaagcaaaggagtttgatgcagcaggaaaagctgttaattgg
ctcaataggcagagtagtccatatgggggtcatggcaccacccaggcaaccatcattgtg
ttccaagcagtggctgagtactataagcaagtaagggctggtcagaatgcagacttggat
gtggaagtgagcgtgagtggacgaaagcgtgccatcagatggactttcaccaggaacaat
gcacatctcacacgttcagacaaggttcagctcaagcaagagtttaatattactgctaag
ggaactggtgctggagttctcaaagtagtgacactttattatgctagacccatagaaaag
aagagtgactgcacaaagtatgatcttaaagttgaattgaaaagagaacgattggtatcg
tatccagatgccctagaaagttacgaggtcatcattgacgttctctttaaggatccgaac
cgagatgccactatgaccattctggatatcggcttgctgacaggatttgtggtggatgaa
aaagatcttacggatctaaccagtgggagggacaaatacatacagaagtttgagatggac
aagcagctttcagaacgaggctccctcattatttacgtagataagatatcgcacaccgtg
ccagacaggattgctttcagagtgcacaagataaccagtgtagctttgcttcaacctgcg
gctgtcagtgtgtacgagtattactctccaggggaacgttgtgtgaagttctaccatcct
gtaaagaaagatggagccctgaacagattgtgcagtgaccagcaggatctgtgccagtgt
gctgaagaaaactgcagtattcagaagaaacagaaaattaatgagcaagaccgggagaaa
aaagcttgtgaagccgacatggattacgtttataaagtcaaagtattgggagtggaccag
aacccaaacacggatttctatgaaatgaagattgaagaggtcctgaaagaaggttctgac
ccagatgtacgtgaaaaagtgaggagcttcatgggtcatgctaactgcagagagtctttt
ggattcgaggaaggcaagagctacctcatcatgggccgaagtgttgacctaccgaggata
gacgaaaagctgcagtacatcttgggtgagcagacgtggattgaatactggcccacaagg
gaggaaggtcaaactcctgcatacaaagacaaatacatcggcatcagtggactggctcaa
accctcactgactttggatgcactacataa
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integrated database retrieval system